WormBase Tree Display for Gene: WBGene00004168
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WBGene00004168 | SMap | S_parent | Sequence | Y71G12B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | pqn-88 | Person_evidence | WBPerson625 | |||||
Sequence_name | Y71G12B.21 | ||||||||
Molecular_name | Y71G12B.21 | ||||||||
Y71G12B.21.1 | |||||||||
CE22925 | |||||||||
Other_name | CELE_Y71G12B.21 | Accession_evidence | NDB | BX284601 | |||||
Public_name | pqn-88 | ||||||||
DB_info | Database | AceView | gene | 1C130 | |||||
WormQTL | gene | WBGene00004168 | |||||||
WormFlux | gene | WBGene00004168 | |||||||
NDB | locus_tag | CELE_Y71G12B.21 | |||||||
NCBI | gene | 171728 | |||||||
RefSeq | protein | NM_058476.5 | |||||||
TrEMBL | UniProtAcc | Q95XP2 | |||||||
UniProt_GCRP | UniProtAcc | Q95XP2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pqn | ||||||||
Allele (30) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (13) | |||||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in MSaapaapa; MSpapaapa; and pharyngeal gland cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including hydrogen sulfide; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y71G12B.21 | |||||||
Corresponding_transcript | Y71G12B.21.1 | ||||||||
Other_sequence | CBC02515_1 | ||||||||
CR12074 | |||||||||
BMC06304_1 | |||||||||
MH05103 | |||||||||
CRC08221_1 | |||||||||
Associated_feature | WBsf218984 | ||||||||
Experimental_info | RNAi_result | WBRNAi00058208 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00002298 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024816 | ||||||||
Expr1161624 | |||||||||
Expr2015079 | |||||||||
Expr2033315 | |||||||||
Drives_construct | WBCnstr00035659 | ||||||||
Construct_product | WBCnstr00035659 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (111) | |||||||||
Map_info | Map | I | Position | -13.5267 | Error | 0.044607 | |||
Positive | Positive_clone | Y71G12B | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |