WormBase Tree Display for Gene: WBGene00004168
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| WBGene00004168 | SMap | S_parent | Sequence | Y71G12B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-88 | Person_evidence | WBPerson625 | |||||
| Sequence_name | Y71G12B.21 | ||||||||
| Molecular_name | Y71G12B.21 | ||||||||
| Y71G12B.21.1 | |||||||||
| CE22925 | |||||||||
| Other_name | CELE_Y71G12B.21 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pqn-88 | ||||||||
| DB_info | Database | AceView | gene | 1C130 | |||||
| WormQTL | gene | WBGene00004168 | |||||||
| WormFlux | gene | WBGene00004168 | |||||||
| NDB | locus_tag | CELE_Y71G12B.21 | |||||||
| NCBI | gene | 171728 | |||||||
| RefSeq | protein | NM_058476.5 | |||||||
| TrEMBL | UniProtAcc | Q95XP2 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XP2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele | WBVar00326724 | ||||||||
| WBVar00326725 | |||||||||
| WBVar01394932 | |||||||||
| WBVar00326726 | |||||||||
| WBVar00326727 | |||||||||
| WBVar00326728 | |||||||||
| WBVar00016326 | |||||||||
| WBVar01499559 | |||||||||
| WBVar00149259 | |||||||||
| WBVar00278055 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01661720 | |||||||||
| WBVar01661721 | |||||||||
| WBVar01499619 | |||||||||
| WBVar00615041 | |||||||||
| WBVar00615042 | |||||||||
| WBVar00615043 | |||||||||
| WBVar00615044 | |||||||||
| WBVar00615045 | |||||||||
| WBVar00615046 | |||||||||
| WBVar00615047 | |||||||||
| WBVar02120561 | |||||||||
| WBVar00615048 | |||||||||
| WBVar01391321 | |||||||||
| WBVar00615049 | |||||||||
| WBVar01889505 | |||||||||
| WBVar00615050 | |||||||||
| WBVar02120756 | |||||||||
| WBVar02015925 | |||||||||
| WBVar01499321 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (13) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in MSaapaapa; MSpapaapa; and pharyngeal gland cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including hydrogen sulfide; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y71G12B.21 | |||||||
| Corresponding_transcript | Y71G12B.21.1 | ||||||||
| Other_sequence | CBC02515_1 | ||||||||
| CR12074 | |||||||||
| BMC06304_1 | |||||||||
| MH05103 | |||||||||
| CRC08221_1 | |||||||||
| Associated_feature | WBsf218984 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00058208 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002298 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024816 | ||||||||
| Expr1161624 | |||||||||
| Expr2015079 | |||||||||
| Expr2033315 | |||||||||
| Drives_construct | WBCnstr00035659 | ||||||||
| Construct_product | WBCnstr00035659 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (111) | |||||||||
| Map_info | Map | I | Position | -13.5267 | Error | 0.044607 | |||
| Positive | Positive_clone | Y71G12B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
