WormBase Tree Display for Gene: WBGene00004059

WBGene00004059 Evidence: Person_evidence: WBPerson583
      WBPerson36
  SMap: S_parent: Sequence: C44B7
  Identity: Version: 1
    Name: CGC_name: pmp-2 Person_evidence: WBPerson36
      Sequence_name: C44B7.9
      Molecular_name: C44B7.9
        C44B7.9.1
        CE02547
      Other_name: CELE_C44B7.9 Accession_evidence: NDB BX284602
      Public_name: pmp-2
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pmp
    Allele (50)
    Strain: WBStrain00001191
      WBStrain00001814
      WBStrain00037764
    RNASeq_FPKM (74)
    GO_annotation (24)
    Ortholog: WBGene00054196 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032339 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00132611 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00193675 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00114723 Pristionchus pacificus From_analysis: OMA
            WormBase-Compara
      WBGene00152329 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g7551 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9682 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4450 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1213 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17452 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24373 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1585 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20534 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22393 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8446 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00128.g5123 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_II.g5215 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12105 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00307.g9128 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21613 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006364 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14042 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g18747 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20267800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4885 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00267230 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00296147 Trichuris muris From_analysis: WormBase-Compara
      WBGene00302384 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000006068 Saccharomyces cerevisiae From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      FB:FBgn0031069 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-2868 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050517-29 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:67 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1349216 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2007 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00004058 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00004060 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004061 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004062 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; ATPase-coupled transmembrane transporter activity; and long-chain fatty acid transporter activity. Predicted to be involved in fatty acid catabolic process; long-chain fatty acid import into peroxisome; and peroxisome organization. Predicted to be located in peroxisomal membrane. Expressed in intestine. Human ortholog(s) of this gene implicated in Zellweger syndrome and congenital bile acid synthesis defect 5. Is an ortholog of human ABCD3 (ATP binding cassette subfamily D member 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:905 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:67)
      DOID:0111066 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:67)
  Molecular_info: Corresponding_CDS: C44B7.9
    Corresponding_transcript: C44B7.9.1
    Other_sequence (51)
    Associated_feature: WBsf650194
      WBsf981214
      WBsf223247
  Experimental_info: RNAi_result: WBRNAi00103675 Inferred_automatically: RNAi_primary
      WBRNAi00029789 Inferred_automatically: RNAi_primary
      WBRNAi00042434 Inferred_automatically: RNAi_primary
      WBRNAi00102607 Inferred_automatically: RNAi_primary
      WBRNAi00102855 Inferred_automatically: RNAi_primary
      WBRNAi00011916 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5496
      Expr1019896
      Expr1031957
      Expr1146423
      Expr2014973
      Expr2033208
    Drives_construct: WBCnstr00002084
      WBCnstr00035717
    Construct_product: WBCnstr00035717
    Microarray_results (20)
    Expression_cluster (153)
    Interaction (37)
  Map_info: Map: II Position: 0.13554 Error: 0.001335
    Positive: Positive_clone: C44B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026800
    WBPaper00028945
    WBPaper00038491
    WBPaper00047097
    WBPaper00055090
    WBPaper00056693
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene