WormBase Tree Display for Gene: WBGene00004062
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| WBGene00004062 | Evidence | Person_evidence | WBPerson583 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson36 | |||||||||
| SMap | S_parent | Sequence | T10H9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | pmp-5 | Person_evidence | WBPerson36 | |||||
| Sequence_name | T10H9.5 | ||||||||
| Molecular_name | T10H9.5a | ||||||||
| T10H9.5a.1 | |||||||||
| CE18253 | |||||||||
| T10H9.5c | |||||||||
| CE38546 | |||||||||
| T10H9.5c.1 | |||||||||
| Other_name | CELE_T10H9.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | pmp-5 | ||||||||
| DB_info | Database | AceView | gene | 5H144 | |||||
| WormQTL | gene | WBGene00004062 | |||||||
| WormFlux | gene | WBGene00004062 | |||||||
| NDB | locus_tag | CELE_T10H9.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004062|UniProtKB=H2L034 | |||||||
| family | PTHR11384 | ||||||||
| NCBI | gene | 179056 | |||||||
| RefSeq | protein | NM_072288.7 | |||||||
| NM_001028960.6 | |||||||||
| TrEMBL | UniProtAcc | H2L034 | |||||||
| H2L035 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L034 | |||||||
| OMIM | gene | 603214 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pmp | ||||||||
| Allele (54) | |||||||||
| Strain | WBStrain00001180 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00004058 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00004059 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004060 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004061 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity; ATPase-coupled transmembrane transporter activity; and long-chain fatty acid transporter activity. Predicted to be involved in fatty acid catabolic process; long-chain fatty acid import into peroxisome; and peroxisome organization. Predicted to be located in peroxisomal membrane. Is an ortholog of human ABCD4 (ATP binding cassette subfamily D member 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | EFO:MONDO:0016826 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:68) | ||||
| Molecular_info | Corresponding_CDS | T10H9.5a | |||||||
| T10H9.5c | |||||||||
| Corresponding_CDS_history | T10H9.5b:wp121 | ||||||||
| T10H9.5b:wp261 | |||||||||
| Corresponding_transcript | T10H9.5a.1 | ||||||||
| T10H9.5c.1 | |||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf652723 | ||||||||
| WBsf718325 | |||||||||
| WBsf1000325 | |||||||||
| WBsf1000326 | |||||||||
| WBsf1019838 | |||||||||
| WBsf233842 | |||||||||
| WBsf233843 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018575 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002281 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053090 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035459 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1409 | ||||||||
| Expr6669 | |||||||||
| Expr6670 | |||||||||
| Expr1022481 | |||||||||
| Expr1031960 | |||||||||
| Expr1156696 | |||||||||
| Expr2014976 | |||||||||
| Expr2033211 | |||||||||
| Drives_construct | WBCnstr00002072 | ||||||||
| WBCnstr00004211 | |||||||||
| WBCnstr00035714 | |||||||||
| Construct_product | WBCnstr00035714 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (342) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | V | Position | 0.132321 | Error | 2.7e-05 | |||
| Positive | Positive_clone | T10H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00047097 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060431 | |||||||||
| WBPaper00061619 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
