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WormBase Tree Display for Gene: WBGene00004014

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Name Class

WBGene00004014SMapS_parentSequenceY37E3
IdentityVersion1
NameCGC_namephb-1Person_evidenceWBPerson364
Sequence_nameY37E3.9
Molecular_nameY37E3.9
Y37E3.9.1
CE26775
Other_nameCELE_Y37E3.9Accession_evidenceNDBBX284601
Public_namephb-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classphb
Allele (26)
RNASeq_FPKM (74)
GO_annotation (19)
Contained_in_operonCEOP1036
OrthologWBGene00060585Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00040683Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00094721Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00158571Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00133675Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00160707Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00226656Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9694Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2088Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7385Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11465Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g11062Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7454Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8872Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21267Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23192Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9661Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00482.g11365Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_14517.g24680Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-phb-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9802Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02566.g27042Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18668Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001073Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06186Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14756Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10236500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g287Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238247Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00262435Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288012Trichuris murisFrom_analysisWormBase-Compara
SGD:S000003364Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0002031Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-6577Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:8912Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:97572Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:3322Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00004015Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionphb-1 encodes the C. elegans ortholog of prohibitin PHB1; loss of phb-1 activity via RNAi indicates that phb-1 function is required for mitochondrial organization and morphology and for embryonic, germline, and somatic gonad development; PHB-1, along with prohibitin subunit PHB-2, forms a macromolecular complex that localizes to mitochondrial membranes; PHB-1 and PHB-2 are dependent upon one another for stability: loss of either phb-1 or phb-2 activity via RNAi results in depletion of both protein products.Paper_evidenceWBPaper00006039
Curator_confirmedWBPerson1843
Date_last_updated20 Dec 2010 00:00:00
Automated_descriptionInvolved in several processes, including defecation; developmental process involved in reproduction; and mitochondrion morphogenesis. Located in mitochondrial membrane. Part of mitochondrial prohibitin complex. Expressed in several structures, including body wall musculature; excretory canal; hypodermis; intestine; and pharynx. Human ortholog(s) of this gene implicated in several diseases, including cervix uteri carcinoma in situ; prostate carcinoma in situ; and sporadic breast cancer. Is an ortholog of human PHB1 (prohibitin 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:8991Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8912)
DOID:8634Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8912)
DOID:2671Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8912)
DOID:8029Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8912)
DOID:1612Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8912)
Molecular_infoCorresponding_CDSY37E3.9
Corresponding_transcriptY37E3.9.1
Other_sequence (132)
Associated_featureWBsf654771
WBsf656007
WBsf980953
WBsf217273
Experimental_infoRNAi_result (121)
Expr_patternExpr8823
Expr1014089
Expr1031921
Expr1159459
Expr2014888
Expr2033123
Drives_constructWBCnstr00013545
Construct_productWBCnstr00013545
Microarray_results (17)
Expression_cluster (150)
Interaction (139)
Map_infoMapIPosition-11.8948Error0.038996
PositivePositive_cloneY37E3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (16)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene