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WormBase Tree Display for Gene: WBGene00003992

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Name Class

WBGene00003992SMapS_parentSequenceZK381
IdentityVersion1
NameCGC_namepgl-1Person_evidenceWBPerson632
Sequence_nameZK381.4
Molecular_nameZK381.4a
ZK381.4a.1
CE25689
ZK381.4b
CE07628
ZK381.4a.2
ZK381.4b.1
Other_nameCELE_ZK381.4Accession_evidenceNDBBX284604
Public_namepgl-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpgl
Allele (59)
Legacy_information[C.elegansII] ct131 : germline P granules unstained by some(not all) monoclonal antibodies. 5% sterile, Mes if grown at 26C. Cloned: cosmid rescue (B0318). [SS]
P granules are not stained by K76 or OIC1D4, two anti-P-granule monoclonal antibodies. Mutants display sterility that is temperature-sensitive and has both a maternal and a nonmaternal component.
Strain (22)
RNASeq_FPKM (74)
GO_annotation (33)
Ortholog (22)
Paralog (38)
Structured_descriptionConcise_descriptionpgl-1 encodes a predicted RNA-binding protein that contains a number of C-terminal RGG box motifs; PGL-1 activity is required at high temperatures during midlarval to adult stages for postembryonic germline development and hence fertility, and also for proper formation of the germline-specific P granules; PGL-1 protein, supplied maternally and embryonically, is a constitutive P granule component and thus, its localization is cytoplasmic in oocytes and early embryos, while perinuclear in the germline blastomere P4 and proliferating germ cells of larvae and adults; pgl-1 mRNA is expressed exclusively in hermaphrodite and male germlines and is detectable at all stages of development, with highest levels seen in adults; PGL-1 localization to P granules requires wild-type activity of the predicted germline helicase GLH-1.Paper_evidenceWBPaper00003186
WBPaper00004672
WBPaper00004940
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated26 Aug 2004 00:00:00
Automated_descriptionEnables RNA endonuclease activity; identical protein binding activity; and protein self-association. Involved in P granule organization and germ-line stem cell division. Located in P granule. Expressed in germ line.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK381.4a
ZK381.4b
Corresponding_CDS_historyZK381.4:wp150
Corresponding_transcriptZK381.4a.1
ZK381.4a.2
ZK381.4b.1
Other_sequenceCR03959
CBC03903_1
CRC01255_1
CR03489
JI171371.1
Associated_featureWBsf977133
WBsf977134
WBsf230205
Experimental_infoRNAi_resultWBRNAi00113912Inferred_automaticallyRNAi_primary
WBRNAi00021989Inferred_automaticallyRNAi_primary
WBRNAi00059393Inferred_automaticallyRNAi_primary
WBRNAi00069464Inferred_automaticallyRNAi_primary
WBRNAi00007860Inferred_automaticallyRNAi_primary
WBRNAi00027792Inferred_automaticallyRNAi_primary
WBRNAi00084326Inferred_automaticallyRNAi_primary
WBRNAi00084334Inferred_automaticallyRNAi_primary
WBRNAi00084341Inferred_automaticallyRNAi_primary
Expr_pattern (11)
Drives_constructWBCnstr00035758
Construct_product (25)
Regulate_expr_cluster (19)
Antibody (25)
Microarray_results (24)
Expression_cluster (198)
InteractionWBInteraction000003051
WBInteraction000003052
WBInteraction000005692
WBInteraction000030888
WBInteraction000030891
WBInteraction000031498
WBInteraction000031499
WBInteraction000052025
WBInteraction000052032
WBInteraction000111207
WBInteraction000119622
WBInteraction000121091
WBInteraction000133877
WBInteraction000134528
WBInteraction000137568
WBInteraction000139084
WBInteraction000139086
WBInteraction000139092
WBInteraction000144391
WBInteraction000149313
WBInteraction000160365
WBInteraction000160368
WBInteraction000163352
WBInteraction000164880
WBInteraction000166177
WBInteraction000166178
WBInteraction000168309
WBInteraction000171679
WBInteraction000175847
WBInteraction000177388
WBInteraction000181334
WBInteraction000181819
WBInteraction000183585
WBInteraction000188268
WBInteraction000189846
WBInteraction000190830
WBInteraction000195819
WBInteraction000199247
WBInteraction000199850
WBInteraction000201599
WBInteraction000203119
WBInteraction000203832
WBInteraction000204161
WBInteraction000204715
WBInteraction000205525
WBInteraction000209221
WBInteraction000219832
WBInteraction000221993
WBInteraction000222339
WBInteraction000223083
WBInteraction000224530
WBInteraction000224581
WBInteraction000224878
WBInteraction000227586
WBInteraction000234052
WBInteraction000236496
WBInteraction000237122
WBInteraction000238694
WBInteraction000239182
WBInteraction000241836
WBInteraction000242467
WBInteraction000245368
WBInteraction000245407
WBInteraction000247872
WBInteraction000251008
WBInteraction000251816
WBInteraction000252220
WBInteraction000253668
WBInteraction000254410
WBInteraction000256197
WBInteraction000256821
WBInteraction000257440
WBInteraction000260169
WBInteraction000261328
WBInteraction000263393
WBInteraction000266931
WBInteraction000267845
WBInteraction000268081
WBInteraction000273105
WBInteraction000273446
WBInteraction000276241
WBInteraction000276590
WBInteraction000276733
WBInteraction000277823
WBInteraction000279098
WBInteraction000280009
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WBInteraction000290073
WBInteraction000290933
WBInteraction000294834
WBInteraction000300966
WBInteraction000301601
WBInteraction000306203
WBInteraction000306889
WBInteraction000306905
WBInteraction000310003
WBInteraction000310231
WBInteraction000310909
WBInteraction000312301
WBInteraction000312993
WBInteraction000314438
WBInteraction000314797
WBInteraction000315239
WBInteraction000315512
WBInteraction000318010
WBInteraction000318215
WBInteraction000325203
WBInteraction000326169
WBInteraction000327934
WBInteraction000330475
WBInteraction000333111
WBInteraction000334543
WBInteraction000335413
WBInteraction000337360
WBInteraction000344162
WBInteraction000347568
WBInteraction000350119
WBInteraction000351463
WBInteraction000357893
WBInteraction000359354
WBInteraction000362788
WBInteraction000366502
WBInteraction000367700
WBInteraction000373240
WBInteraction000375678
WBInteraction000376193
WBInteraction000383194
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WBInteraction000405421
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WBInteraction000410020
WBInteraction000413295
WBInteraction000417957
WBInteraction000420565
WBInteraction000421468
WBInteraction000425993
WBInteraction000430355
WBInteraction000433506
WBInteraction000438756
WBInteraction000440652
WBInteraction000444468
WBInteraction000446611
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WBInteraction000448273
WBInteraction000450868
WBInteraction000456606
WBInteraction000458697
WBInteraction000501439
WBInteraction000501440
WBInteraction000501441
WBInteraction000501442
WBInteraction000501511
WBInteraction000501806
WBInteraction000501821
WBInteraction000502125
WBInteraction000502157
WBInteraction000502232
WBInteraction000502265
WBInteraction000502364
WBInteraction000502657
WBInteraction000502665
WBInteraction000503448
WBInteraction000503468
WBInteraction000503867
WBInteraction000503868
WBInteraction000503869
WBInteraction000503870
WBInteraction000503871
WBInteraction000503872
WBInteraction000503873
WBInteraction000503874
WBInteraction000503875
WBInteraction000503876
WBInteraction000503992
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WBInteraction000504356
WBInteraction000504357
WBInteraction000504358
WBInteraction000504359
WBInteraction000504635
WBInteraction000504636
WBInteraction000504695
WBInteraction000504774
WBInteraction000505150
WBInteraction000512762
WBInteraction000512766
WBInteraction000512767
WBInteraction000512768
WBInteraction000512769
WBInteraction000512770
WBInteraction000512771
WBInteraction000512772
WBInteraction000512773
WBInteraction000512774
WBInteraction000512775
WBInteraction000512776
WBInteraction000512777
WBInteraction000512778
WBInteraction000512779
WBInteraction000512780
WBInteraction000512781
WBInteraction000512782
WBInteraction000512783
WBInteraction000512784
WBInteraction000512785
WBInteraction000512786
WBInteraction000512787
WBInteraction000512788
WBInteraction000512789
WBInteraction000512790
WBInteraction000512791
WBInteraction000512792
WBInteraction000512793
WBInteraction000512794
WBInteraction000512795
WBInteraction000512796
WBInteraction000512801
WBInteraction000518823
WBInteraction000518918
WBInteraction000519014
WBInteraction000520771
WBInteraction000520872
WBInteraction000520873
WBInteraction000524403
WBInteraction000525368
WBInteraction000534886
WBInteraction000538960
WBInteraction000540476
WBInteraction000540549
WBInteraction000540614
WBInteraction000540615
WBInteraction000540616
WBInteraction000540801
WBInteraction000540802
WBInteraction000540803
WBInteraction000540804
WBInteraction000541000
WBInteraction000541248
WBInteraction000541401
WBInteraction000541576
WBInteraction000541635
WBInteraction000544032
WBInteraction000549000
WBInteraction000549004
WBInteraction000549006
WBInteraction000549097
WBInteraction000549380
WBInteraction000550443
WBInteraction000550473
WBInteraction000550521
WBInteraction000550543
WBInteraction000550545
WBInteraction000550550
WBInteraction000550596
WBInteraction000550636
WBInteraction000550639
WBInteraction000550643
WBInteraction000555594
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WBInteraction000555600
WBInteraction000556302
WBInteraction000556303
WBInteraction000556389
WBInteraction000556411
WBInteraction000557072
WBInteraction000558171
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WBInteraction000558321
WBInteraction000558322
WBInteraction000558325
WBInteraction000558327
WBInteraction000562653
WBInteraction000562728
WBInteraction000563522
WBInteraction000564145
WBInteraction000564624
WBInteraction000565000
WBInteraction000565595
WBInteraction000565736
WBInteraction000566000
WBInteraction000567234
WBInteraction000567770
WBInteraction000568460
WBInteraction000571486
WBInteraction000573297
WBInteraction000573338
WBInteraction000574725
WBInteraction000575756
WBInteraction000576118
WBInteraction000577036
WBInteraction000577178
WBInteraction000577251
WBInteraction000577679
WBInteraction000578969
WBInteraction000578975
WBInteraction000580239
WBInteraction000581941
WBInteraction000583723
WBInteraction000584074
WBInteraction000584570
WBInteraction000585394
WBInteraction000586361
Map_infoMapIVPosition3.25355Error0.002367
Well_ordered
PositiveInside_rearrnDf41
Positive_cloneB0318
ZK381Inferred_automaticallyFrom sequence, transcript, pseudogene data
NegativeNegative_cloneC02F1
C25A8
T22D1
Mapping_dataMulti_point3797
3798
3799
3800
3801
4450
Pos_neg_data10690
Reference (159)
MethodGene