WormBase Tree Display for Gene: WBGene00003991
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| WBGene00003991 | Evidence | Person_evidence | WBPerson463 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K03E6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | pfn-3 | Person_evidence | WBPerson75 | |||||
| Sequence_name | K03E6.6 | ||||||||
| Molecular_name | K03E6.6 | ||||||||
| K03E6.6.1 | |||||||||
| CE07332 | |||||||||
| Other_name | CELE_K03E6.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | pfn-3 | ||||||||
| DB_info | Database | AceView | gene | XB698 | |||||
| WormQTL | gene | WBGene00003991 | |||||||
| WormFlux | gene | WBGene00003991 | |||||||
| NDB | locus_tag | CELE_K03E6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003991|UniProtKB=Q21193 | |||||||
| family | PTHR11604 | ||||||||
| NCBI | gene | 180460 | |||||||
| RefSeq | protein | NM_075804.7 | |||||||
| SwissProt | UniProtAcc | Q21193 | |||||||
| TREEFAM | TREEFAM_ID | TF300134 | |||||||
| UniProt_GCRP | UniProtAcc | Q21193 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pfn | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00003252 | ||||||||
| WBStrain00029954 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00003989 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003990 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable actin monomer binding activity. Involved in muscle thin filament assembly. Located in striated muscle dense body. Expressed in body wall musculature. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K03E6.6 | |||||||
| Corresponding_transcript | K03E6.6.1 | ||||||||
| Other_sequence (53) | |||||||||
| Associated_feature | WBsf716621 | ||||||||
| WBsf1003935 | |||||||||
| WBsf1003936 | |||||||||
| WBsf1022210 | |||||||||
| WBsf1022211 | |||||||||
| WBsf236998 | |||||||||
| WBsf236999 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00098009 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049838 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022831 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033920 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016547 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3807 | ||||||||
| Expr3811 | |||||||||
| Expr6318 | |||||||||
| Expr1014538 | |||||||||
| Expr1031907 | |||||||||
| Expr1153551 | |||||||||
| Expr2014853 | |||||||||
| Expr2033088 | |||||||||
| Drives_construct | WBCnstr00003727 | ||||||||
| WBCnstr00011671 | |||||||||
| WBCnstr00035759 | |||||||||
| Construct_product | WBCnstr00035759 | ||||||||
| Antibody | WBAntibody00001034 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (188) | |||||||||
| Interaction (106) | |||||||||
| Map_info | Map | X | Position | -18.7365 | Error | 0.004034 | |||
| Positive | Positive_clone | K03E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024757 | ||||||||
| WBPaper00026958 | |||||||||
| WBPaper00027155 | |||||||||
| WBPaper00032338 | |||||||||
| WBPaper00033099 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040494 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057543 | |||||||||
| WBPaper00058750 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
