WormBase Tree Display for Gene: WBGene00003981
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| WBGene00003981 | SMap | S_parent | Sequence | F18G5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pes-8 | Person_evidence | WBPerson266 | |||||
| Sequence_name | F18G5.2 | ||||||||
| Molecular_name | F18G5.2a | ||||||||
| F18G5.2a.1 | |||||||||
| CE53188 | |||||||||
| F18G5.2b | |||||||||
| CE53356 | |||||||||
| F18G5.2b.1 | |||||||||
| Other_name | CELE_F18G5.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | pes-8 | ||||||||
| DB_info | Database | AceView | gene | XJ873 | |||||
| WormQTL | gene | WBGene00003981 | |||||||
| WormFlux | gene | WBGene00003981 | |||||||
| NDB | locus_tag | CELE_F18G5.2 | |||||||
| NCBI | gene | 191742 | |||||||
| RefSeq | protein | NM_001373415.1 | |||||||
| NM_001373414.2 | |||||||||
| TrEMBL | UniProtAcc | A0A4V6M3D6 | |||||||
| A0A4V0INE6 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A4V0INE6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pes | ||||||||
| Allele (72) | |||||||||
| Legacy_information | [C.elegansII] NMK. pes-8:lacZ expression in 3 rectal epithelial cells from L1 onward, spermatheca from L4, uterus in adult (Ut-1, Ut-2, Use);adult male proctodeum. Clone UL#38E12, cosmid F18G5. [Young and Hope 1993; UL] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003970 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Concise_description | pes-8 encodes a novel protein that contains a proline-rich region and a predicted transmembrane domain, but no otherwise recognizably conserved domains; pes-8 was identified in promoter trapping screens and based on large-scale RNA-mediated interference (RNAi) screens, appears to be required for egg laying, germline development, locomotion, and regulation of adult lifespan; a pes-8 reporter is expressed at the cell surfaces of the spermathecal valve cell, the uterine wall, the vulva, and the rectal epithelium; strong expression is also detected in the uterus during its development; PES-8 may be required for normal morphology of the openings of the spermathecal valve, the vulva, and the rectum, a hypothesis consistent with its expression pattern and RNAi phenotype. | Paper_evidence | WBPaper00003306 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in membrane. Expressed in hermaphrodite gonad and rectum. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F18G5.2a | |||||||
| F18G5.2b | |||||||||
| Corresponding_CDS_history | F18G5.2:wp223 | ||||||||
| F18G5.2:wp271 | |||||||||
| Corresponding_transcript | F18G5.2a.1 | ||||||||
| F18G5.2b.1 | |||||||||
| Other_sequence | PPC02034_1 | ||||||||
| PP02576 | |||||||||
| Associated_feature | WBsf236141 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00025139 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00071839 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044967 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085555 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008662 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071625 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr51 | ||||||||
| Expr1024632 | |||||||||
| Expr1031901 | |||||||||
| Expr1148937 | |||||||||
| Expr2014838 | |||||||||
| Expr2033073 | |||||||||
| Drives_construct | WBCnstr00035762 | ||||||||
| Construct_product | WBCnstr00035762 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (227) | |||||||||
| Interaction (43) | |||||||||
| Map_info | Map | X | Position | 0.940254 | |||||
| Positive | Positive_clone | F18G5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00001752 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
