WormBase Tree Display for Gene: WBGene00003952

WBGene00003952 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: C02F5
  Identity: Version: 1
    Name: CGC_name: pbs-6 Person_evidence: WBPerson1551
      Sequence_name: C02F5.9
      Molecular_name: C02F5.9
        C02F5.9.1
        CE26745
      Other_name: 3I332 Accession_evidence: EMBL AF303265
        CELE_C02F5.9 Accession_evidence: NDB BX284603
      Public_name: pbs-6
    DB_info: Database: AceView gene 3J332
        WormQTL gene WBGene00003952
        WormFlux gene WBGene00003952
        NDB locus_tag CELE_C02F5.9
        Panther gene CAEEL|WormBase=WBGene00003952|UniProtKB=P34286
          family PTHR11599
        NCBI gene 176161
        RefSeq protein NM_066405.5
        SwissProt UniProtAcc P34286
        TREEFAM TREEFAM_ID TF106218
        UniProt_GCRP UniProtAcc P34286
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:33 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pbs
    Allele (18)
    Strain: WBStrain00036983
      WBStrain00036996
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (36)
    Paralog (13)
    Structured_description: Concise_description: The pbs-6 gene encodes a homolog of mammalian PSMB1. Paper_evidence: WBPaper00004588
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be involved in proteasomal protein catabolic process. Predicted to be located in nucleus. Predicted to be part of proteasome core complex, beta-subunit complex. Expressed in pharynx. Is an ortholog of human PSMB1 (proteasome 20S subunit beta 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C02F5.9
    Corresponding_transcript: C02F5.9.1
    Other_sequence (72)
    Associated_feature: WBsf651257
      WBsf667143
      WBsf667144
      WBsf667145
      WBsf667146
      WBsf227099
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr3879
      Expr1010549
      Expr1031878
      Expr1143569
      Expr2014770
      Expr2033004
    Drives_construct: WBCnstr00011711
      WBCnstr00035780
    Construct_product: WBCnstr00035780
    Microarray_results (18)
    Expression_cluster (137)
    Interaction: WBInteraction000009899
      WBInteraction000028503
      WBInteraction000029113
      WBInteraction000029259
      WBInteraction000031398
      WBInteraction000031487
      WBInteraction000033815
      WBInteraction000033988
      WBInteraction000034856
      WBInteraction000035023
      WBInteraction000035278
      WBInteraction000035279
      WBInteraction000035478
      WBInteraction000036803
      WBInteraction000037547
      WBInteraction000038431
      WBInteraction000039971
      WBInteraction000040587
      WBInteraction000041455
      WBInteraction000042046
      WBInteraction000042340
      WBInteraction000043618
      WBInteraction000043619
      WBInteraction000043620
      WBInteraction000043621
      WBInteraction000043622
      WBInteraction000043623
      WBInteraction000043624
      WBInteraction000043625
      WBInteraction000043626
      WBInteraction000043627
      WBInteraction000044273
      WBInteraction000045246
      WBInteraction000046612
      WBInteraction000047054
      WBInteraction000047192
      WBInteraction000048700
      WBInteraction000048993
      WBInteraction000048994
      WBInteraction000049887
      WBInteraction000050787
      WBInteraction000050822
      WBInteraction000101411
      WBInteraction000101424
      WBInteraction000101438
      WBInteraction000101521
      WBInteraction000101810
      WBInteraction000101855
      WBInteraction000101994
      WBInteraction000101996
      WBInteraction000102678
      WBInteraction000102931
      WBInteraction000102962
      WBInteraction000103003
      WBInteraction000103878
      WBInteraction000105309
      WBInteraction000105670
      WBInteraction000107142
      WBInteraction000108804
      WBInteraction000108859
      WBInteraction000109657
      WBInteraction000109847
      WBInteraction000111022
      WBInteraction000111189
      WBInteraction000111516
      WBInteraction000111517
      WBInteraction000111518
      WBInteraction000111519
      WBInteraction000111520
      WBInteraction000111521
      WBInteraction000111522
      WBInteraction000111523
      WBInteraction000111524
      WBInteraction000111525
      WBInteraction000111526
      WBInteraction000111608
      WBInteraction000112260
      WBInteraction000112544
      WBInteraction000113324
      WBInteraction000114489
      WBInteraction000115667
      WBInteraction000116093
      WBInteraction000116094
      WBInteraction000119020
      WBInteraction000125696
      WBInteraction000125697
      WBInteraction000133026
      WBInteraction000133027
      WBInteraction000135212
      WBInteraction000141521
      WBInteraction000152697
      WBInteraction000154312
      WBInteraction000154313
      WBInteraction000154314
      WBInteraction000154315
      WBInteraction000168392
      WBInteraction000179512
      WBInteraction000180314
      WBInteraction000183646
      WBInteraction000187507
      WBInteraction000207878
      WBInteraction000207917
      WBInteraction000218043
      WBInteraction000218044
      WBInteraction000218045
      WBInteraction000218046
      WBInteraction000218047
      WBInteraction000218048
      WBInteraction000218049
      WBInteraction000229316
      WBInteraction000248127
      WBInteraction000251860
      WBInteraction000288379
      WBInteraction000315939
      WBInteraction000316292
      WBInteraction000331373
      WBInteraction000341481
      WBInteraction000375500
      WBInteraction000381302
      WBInteraction000384283
      WBInteraction000384284
      WBInteraction000384285
      WBInteraction000385233
      WBInteraction000390265
      WBInteraction000394443
      WBInteraction000399183
      WBInteraction000405563
      WBInteraction000416118
      WBInteraction000426542
      WBInteraction000433309
      WBInteraction000434244
      WBInteraction000449221
      WBInteraction000450519
      WBInteraction000451176
      WBInteraction000452157
      WBInteraction000454458
      WBInteraction000463888
      WBInteraction000464390
      WBInteraction000467129
      WBInteraction000471385
      WBInteraction000472934
      WBInteraction000511202
      WBInteraction000511203
      WBInteraction000511204
      WBInteraction000511205
      WBInteraction000511207
      WBInteraction000511208
      WBInteraction000511210
      WBInteraction000511213
      WBInteraction000511216
      WBInteraction000511217
      WBInteraction000516638
      WBInteraction000516641
      WBInteraction000516642
      WBInteraction000516643
      WBInteraction000516644
      WBInteraction000516645
      WBInteraction000519532
      WBInteraction000519541
      WBInteraction000519591
      WBInteraction000519594
      WBInteraction000519595
      WBInteraction000519600
      WBInteraction000519601
      WBInteraction000519603
      WBInteraction000519605
      WBInteraction000519608
      WBInteraction000519609
      WBInteraction000519611
      WBInteraction000519612
      WBInteraction000520327
      WBInteraction000523125
      WBInteraction000523126
      WBInteraction000523127
      WBInteraction000523128
      WBInteraction000523129
      WBInteraction000523130
      WBInteraction000542088
      WBInteraction000542547
      WBInteraction000547068
      WBInteraction000547069
      WBInteraction000551062
      WBInteraction000551063
      WBInteraction000551064
      WBInteraction000551065
      WBInteraction000551066
      WBInteraction000551067
      WBInteraction000551068
      WBInteraction000560472
      WBInteraction000560473
      WBInteraction000560474
      WBInteraction000560475
      WBInteraction000560476
      WBInteraction000564128
      WBInteraction000568157
      WBInteraction000570776
      WBInteraction000573498
      WBInteraction000577669
      WBInteraction000579451
      WBInteraction000582428
  Map_info: Map: III Position: -0.354369 Error: 0.00031
    Positive: Positive_clone: C02F5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004588
    WBPaper00029221
    WBPaper00030965
    WBPaper00035228
    WBPaper00036083
    WBPaper00038491
    WBPaper00041601
    WBPaper00045571
    WBPaper00055090
    WBPaper00056008
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene