WormBase Tree Display for Gene: WBGene00003877
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WBGene00003877 | SMap | S_parent | Sequence | K04E7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | XH79 | |||||
WormQTL | gene | WBGene00003877 | |||||||
WormFlux | gene | WBGene00003877 | |||||||
NDB | locus_tag | CELE_K04E7.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003877|UniProtKB=Q21219 | |||||||
family | PTHR11654 | ||||||||
NCBI | gene | 180919 | |||||||
RefSeq | protein | NM_076686.7 | |||||||
SwissProt | UniProtAcc | Q21219 | |||||||
UniProt_GCRP | UniProtAcc | Q21219 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 29 Apr 2009 13:55:02 | WBPerson9133 | Name_change | CGC_name | pept-1 | ||||
Other_name | opt-2 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pept | ||||||||
Allele (85) | |||||||||
Possibly_affected_by | WBVar02157263 | ||||||||
Strain | WBStrain00036075 | ||||||||
WBStrain00003894 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (46) | |||||||||
Ortholog (46) | |||||||||
Paralog | WBGene00003876 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00003878 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | pept-1 encodes a low affinity/high capacity oligopeptide transporter; pept-1 is required for uptake of intact peptides from the intestine and thus for normal development, growth, and reproduction; genetic studies indicate that pept-1 interacts with both the daf-2/insulin- and let-363/TOR-signaling pathways to regulate lifespan and with the daf-2 pathway to influence stress response; PEPT-1 is expressed in the intestine where it localizes to the apical membrane. | Paper_evidence | WBPaper00006186 | |||||
WBPaper00024423 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 05 Nov 2009 00:00:00 | ||||||||
Automated_description | Enables dipeptide transmembrane transporter activity. Involved in several processes, including chemical homeostasis; nitrogen compound transport; and regulation of signal transduction. Located in apical plasma membrane. Expressed in intestine. Used to study obesity. Is an ortholog of human SLC15A1 (solute carrier family 15 member 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Experimental_model | DOID:9970 | Homo sapiens | Paper_evidence | WBPaper00034742 | ||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 15 Sep 2021 00:00:00 | ||||||||
Models_disease_asserted | WBDOannot00000178 | ||||||||
Molecular_info | Corresponding_CDS | K04E7.2 | |||||||
Corresponding_transcript | K04E7.2.1 | ||||||||
Other_sequence (23) | |||||||||
Associated_feature | WBsf662881 | ||||||||
WBsf978975 | |||||||||
WBsf1005576 | |||||||||
WBsf1023101 | |||||||||
WBsf235837 | |||||||||
Experimental_info | RNAi_result (49) | ||||||||
Expr_pattern | Expr1421 | ||||||||
Expr8048 | |||||||||
Expr8049 | |||||||||
Expr10732 | |||||||||
Expr1026620 | |||||||||
Expr1031825 | |||||||||
Expr1153607 | |||||||||
Expr2014823 | |||||||||
Expr2033057 | |||||||||
Marker28 | |||||||||
Drives_construct (23) | |||||||||
Construct_product | WBCnstr00004990 | ||||||||
WBCnstr00009194 | |||||||||
WBCnstr00013078 | |||||||||
WBCnstr00014892 | |||||||||
WBCnstr00016252 | |||||||||
WBCnstr00018325 | |||||||||
WBCnstr00037949 | |||||||||
Regulate_expr_cluster | WBPaper00045460:Co-expression_Cluster_1 | ||||||||
WBPaper00045460:Co-expression_Cluster_2 | |||||||||
WBPaper00045460:Co-expression_Cluster_3 | |||||||||
WBPaper00045460:pept-1(lg601)_downregulated | |||||||||
WBPaper00045460:pept-1(lg601)_upregulated | |||||||||
Antibody | WBAntibody00002276 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (236) | |||||||||
Interaction (114) | |||||||||
Map_info | Map | X | Position | -2.89742 | Error | 0.002559 | |||
Positive | Positive_clone | K04E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00003116 | ||||||||
WBPaper00003971 | |||||||||
WBPaper00005976 | |||||||||
WBPaper00006186 | |||||||||
WBPaper00006465 | |||||||||
WBPaper00011545 | |||||||||
WBPaper00018506 | |||||||||
WBPaper00018858 | |||||||||
WBPaper00018859 | |||||||||
WBPaper00024278 | |||||||||
WBPaper00024423 | |||||||||
WBPaper00025195 | |||||||||
WBPaper00026667 | |||||||||
WBPaper00027611 | |||||||||
WBPaper00032077 | |||||||||
WBPaper00032543 | |||||||||
WBPaper00033382 | |||||||||
WBPaper00034742 | |||||||||
WBPaper00035322 | |||||||||
WBPaper00036390 | |||||||||
WBPaper00038111 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00040287 | |||||||||
WBPaper00041129 | |||||||||
WBPaper00041408 | |||||||||
WBPaper00042165 | |||||||||
WBPaper00045460 | |||||||||
WBPaper00046784 | |||||||||
WBPaper00046884 | |||||||||
WBPaper00048904 | |||||||||
WBPaper00049531 | |||||||||
WBPaper00052075 | |||||||||
WBPaper00053532 | |||||||||
WBPaper00054917 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00055920 | |||||||||
WBPaper00056160 | |||||||||
WBPaper00057375 | |||||||||
WBPaper00057429 | |||||||||
WBPaper00059644 | |||||||||
WBPaper00059947 | |||||||||
WBPaper00060602 | |||||||||
WBPaper00061476 | |||||||||
WBPaper00061888 | |||||||||
WBPaper00061938 | |||||||||
WBPaper00062581 | |||||||||
WBPaper00062823 | |||||||||
WBPaper00062847 | |||||||||
WBPaper00063023 | |||||||||
WBPaper00064057 | |||||||||
WBPaper00064071 | |||||||||
WBPaper00064208 | |||||||||
WBPaper00064552 | |||||||||
WBPaper00064601 | |||||||||
WBPaper00064910 | |||||||||
WBPaper00064960 | |||||||||
WBPaper00065331 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |