| WBGene00003850 | SMap | S_parent | Sequence | C34D1 |
|---|
| Identity | Version | 1 |
| | Name | CGC_name | odr-3 | Person_evidence | WBPerson42 |
| | | Sequence_name | C34D1.3 |
| | | Molecular_name | C34D1.3 |
| | | | C34D1.3.1 |
| | | | CE08571 |
| | | Other_name | CELE_C34D1.3 | Accession_evidence | NDB | BX284605 |
| | | Public_name | odr-3 |
| | DB_info | Database | AceView | gene | 5N728 |
| | | | WormQTL | gene | WBGene00003850 |
| | | | WormFlux | gene | WBGene00003850 |
| | | | NDB | locus_tag | CELE_C34D1.3 |
| | | | Panther | gene | CAEEL|WormBase=WBGene00003850|UniProtKB=Q18434 |
| | | | | family | PTHR10218 |
| | | | NCBI | gene | 179806 |
| | | | RefSeq | protein | NM_073889.3 |
| | | | SwissProt | UniProtAcc | Q18434 |
| | | | UniProt_GCRP | UniProtAcc | Q18434 |
| | Species | Caenorhabditis elegans |
| | History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace |
| | Status | Live |
| Gene_info | Biotype | SO:0001217 |
| | Gene_class | odr |
| | Allele (56) |
| | Legacy_information | [Bargmann CI] defective chemotaxis to volatile odorants; osmotic avoidance defective |
| | | [C.elegansII] n2150 : reduced response to all volatile odorants; defective osmotic avoidance; some chemotactic defects. Cilia of sensory neuron AWC stunted. OA1: n2046 (weaker phenotypes). [Bargmann et al. 1993] |
| | Strain | WBStrain00027155 |
| | | WBStrain00028996 |
| | | WBStrain00005221 |
| | | WBStrain00005238 |
| | RNASeq_FPKM (74) |
| | GO_annotation (33) |
| | Ortholog (46) |
| | Paralog (21) |
| | Structured_description | Concise_description | odr-3 encodes a G protein alpha subunit; odr-3 activity is required for normal chemotaxis, odorant avoidance, and nociceptive function as well as cilium morphogenesis in chemosensory neurons; an ODR-3::GFP is expressed in five pairs of sensory neurons AWA, AWB, AWC, ASH, and ADF; the AWC neurons consistently express GFP most strongly, while the AWB neurons express at lower levels and the AWA, ASH, and ADF neurons express only weakly; in AWC neurons, ODR-3::GFP localizes to cilia which have a characteristic wing-shaped morphology. | Paper_evidence | WBPaper00002996 |
| | | | | | WBPaper00024365 |
| | | | | Curator_confirmed | WBPerson1843 |
| | | | | Date_last_updated | 05 Nov 2007 00:00:00 |
| | | Automated_description | Enables olfactory receptor binding activity. Involved in several processes, including hyperosmotic response; olfactory behavior; and response to odorant. Located in neuronal cell body and non-motile cilium. Expressed in amphid neurons. | Paper_evidence | WBPaper00065943 |
| | | | | Curator_confirmed | WBPerson324 |
| | | | | | WBPerson37462 |
| | | | | Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase |
| | | | | Date_last_updated | 29 Nov 2023 00:00:00 |
| Molecular_info | Corresponding_CDS | C34D1.3 |
| | Corresponding_transcript | C34D1.3.1 |
| | Other_sequence (15) |
| | Associated_feature | WBsf1001774 |
| | | WBsf1001775 |
| | | WBsf1001776 |
| | | WBsf1001777 |
| | | WBsf1001778 |
| | | WBsf1020690 |
| | | WBsf1020691 |
| | | WBsf1020692 |
| | | WBsf234783 |
| Experimental_info | RNAi_result | WBRNAi00029513 | Inferred_automatically | RNAi_primary |
| | | WBRNAi00011587 | Inferred_automatically | RNAi_primary |
| | | WBRNAi00041860 | Inferred_automatically | RNAi_primary |
| | Expr_pattern (13) |
| | Drives_construct (83) |
| | Construct_product | WBCnstr00005410 |
| | | WBCnstr00013107 |
| | | WBCnstr00018501 |
| | | WBCnstr00035830 |
| | Antibody | WBAntibody00000161 |
| | | WBAntibody00000774 |
| | | WBAntibody00001128 |
| | Microarray_results (18) |
| | Expression_cluster | WBPaper00037950:A-class-motor-neurons_L2-larva_expressed |
| | | WBPaper00037950:all-neurons_CoreEnriched |
| | | WBPaper00037950:all-neurons_embryo_enriched |
| | | WBPaper00037950:all-neurons_L1-larva_expressed |
| | | WBPaper00037950:all-neurons_L2-larva_expressed |
| | | WBPaper00037950:all-neurons_larva_enriched |
| | | WBPaper00037950:AVA-neuron_L1-larva_expressed |
| | | WBPaper00037950:BAG-neuron_blastula-embryo_expressed |
| | | WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed |
| | | WBPaper00037950:coelomocytes_L2-larva_expressed |
| | | WBPaper00037950:excretory-cell_L2-larva_expressed |
| | | WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed |
| | | WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed |
| | | WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq |
| | | WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray |
| | | WBPaper00040221:DAF-12_target_ALF4 |
| | | WBPaper00040560:hpl-2_embryo_upregulated |
| | | WBPaper00042215:wdr-23(tm1817)_upregulated |
| | | WBPaper00044736:flat_dev_expression |
| | | WBPaper00045390:tunicamycin_downregulated |
| | | WBPaper00045390:ubc-9(RNAi)_downregulated |
| | | WBPaper00046012:tdp-1(ok803)_upregulated |
| | | WBPaper00048988:neuron_expressed |
| | | WBPaper00049545:jmjd-3.1(+)_upregulated |
| | | WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated |
| | | WBPaper00050488:adult_vs_dauer_regulated_N2_20C |
| | | WBPaper00050726:OsmoticStress_regulated_Food |
| | | WBPaper00050726:OsmoticStress_regulated_NoFood |
| | | WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult |
| | | WBPaper00053184:sma-2(rax5)_upregulated |
| | | WBPaper00053184:sma-4(rax3)_upregulated |
| | | WBPaper00053302:stavudine_24h_regulated |
| | | WBPaper00053302:zidovudine_72h_regulated |
| | | WBPaper00053771:up_at_3h-NaCl |
| | | WBPaper00053771:up_at_24h-NaCl |
| | | WBPaper00054758:alg-1(gk204)_upregulated |
| | | WBPaper00055060:flr-1(RNAi)_upregulated |
| | | WBPaper00055103:thoc-5(wy822)_upregulated |
| | | WBPaper00055354:Rapamycin-Allantoin_downregulated |
| | | WBPaper00055386:daf-2(e1370)_upregulated |
| | | WBPaper00055648:male-CEM-neurons_expressed |
| | | WBPaper00055648:male-tail_expressed |
| | | WBPaper00055648:nerve-ring_expressed |
| | | WBPaper00055971:nhl-2(ok818)_25C_downregulated |
| | | WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047) |
| | | WBPaper00056161:male_enriched_siRNA |
| | | WBPaper00056284:ints-1(RNAi)_downregulated |
| | | WBPaper00056443:sek-1(km4)_upregulated |
| | | WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated |
| | | WBPaper00057041:spc-1(cas971)_downregulated |
| | | WBPaper00058598:mex-1(or286)_upregulated |
| | | WBPaper00058598:mex-3(eu149)_upregulated |
| | | WBPaper00058598:spn-4(tm291)_upregulated |
| | | WBPaper00058711:paraquat_downregulated |
| | | WBPaper00058711:skn-1(lax188)_upregulated |
| | | WBPaper00058948:PA14_downregulated |
| | | WBPaper00059027:neuron-synapses_depleted |
| | | WBPaper00059421:daf-3(mgDf90)_downregulated |
| | | WBPaper00059566:wdr-23(mac32)_upregulated |
| | | WBPaper00059664:srbc-48(ac23)_upregulated |
| | | WBPaper00060358:B.thuringiensis_pathogen_regulated_N2 |
| | | WBPaper00060459:bcat-1(RNAi)_upregulated |
| | | WBPaper00060526:plp-1(ok2155)_downregulated |
| | | WBPaper00060661:sensory-neuron_enriched |
| | | WBPaper00060811:L1_vs_adult_upregulated_neural |
| | | WBPaper00061040:eat-2(ad1116)_upregulated |
| | | WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640) |
| | | WBPaper00061340:ADF |
| | | WBPaper00061340:AIA |
| | | WBPaper00061340:ASH |
| | | WBPaper00061340:ASK |
| | | WBPaper00061340:AWA |
| | | WBPaper00061340:AWB |
| | | WBPaper00061340:AWC |
| | | WBPaper00061340:PVT |
| | | WBPaper00061341:28C_24h_upregulated |
| | | WBPaper00061341:28C_48h_upregulated |
| | | WBPaper00061479:hda-1(ne4752)_upregulated |
| | | WBPaper00061527:sol-1-jnk-1_18695 |
| | | WBPaper00061651:AWA_enriched |
| | | WBPaper00061651:AWC_OFF_enriched |
| | | WBPaper00061651:AWC_ON_enriched |
| | | WBPaper00061995:mter-4(syb3662syb3403)_downregulated |
| | | WBPaper00062103:neuron_enriched |
| | | WBPaper00062159:hda-2(ok1479)_upregulated |
| | | WBPaper00062325:muscle_depleted_coding-RNA |
| | | WBPaper00062345:bortezomib_4h_downregulated_N2 |
| | | WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium |
| | | WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141) |
| | | WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20) |
| | | WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20) |
| | | WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141) |
| | | WBPaper00064306:Agaro-oligosaccharides_upregulated |
| | | WBPaper00064769:him-17(me24)_upregulated |
| | | WBPaper00065096:25C_vs_20C_downregulated |
| | | WBPaper00065158:AFD_enriched |
| | | WBPaper00065581:hpk-1(pk1393)_upregulated |
| | | WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977) |
| | | WBPaper00065749:Heat-Shock_downregulated_N2 |
| | | WBPaper00065841:35_2 |
| | | WBPaper00065841:35_3 |
| | | WBPaper00065841:47_0 |
| | | WBPaper00065841:47_1 |
| | | WBPaper00065841:77_0 |
| | | WBPaper00065841:84_0 |
| | | WBPaper00065841:101_0 |
| | | WBPaper00065841:106_0 |
| | | WBPaper00065841:137_0 |
| | | WBPaper00065841:138_0 |
| | | WBPaper00066062:xrep-4(lax137)_upregulated |
| | | WBPaper00066110:tetraploid_vs_diploid_upregulated |
| | | cgc4489_group_18 |
| | | WBPaper00024671:AFD_AWB_vs_unsorted_upregulated |
| | | WBPaper00024671:AFD_vs_AWB_downregulated |
| | | WBPaper00025141:N2_Expressed_Genes |
| | | WBPaper00030985:Erwinia_carotovora_upregulated |
| | | WBPaper00031532:Larva_Pan_Neuronal_Enriched |
| | | WBPaper00041939:control_vs_UVC-EtBr-exposed_48h |
| | | WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h |
| | | WBPaper00045673:colistin_upregulated |
| | | WBPaper00056330:mrps-5(RNAi)_upregulated |
| | Interaction (68) |
| | Anatomy_function | WBbtf0003 |
| | | WBbtf0004 |
| | | WBbtf1023 |
| | | WBbtf1024 |
| Map_info | Map | V | Position | 4.99556 | Error | 0.01206 |
| | Well_ordered |
| | Positive | Positive_clone | C34D1 | Inferred_automatically | From sequence, transcript, pseudogene data |
| | Mapping_data | Multi_point | 2052 |
| | | | 2053 |
| | | | 2054 |
| | | | 4713 |
| | | | 5548 |
| Reference (150) |
| Method | Gene |
