WormBase Tree Display for Gene: WBGene00003778
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| WBGene00003778 | SMap | S_parent | Sequence | C15H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nnt-1 | |||||||
| Sequence_name | C15H9.1 | ||||||||
| Molecular_name | C15H9.1 | ||||||||
| C15H9.1.1 | |||||||||
| CE08176 | |||||||||
| Other_name | CELE_C15H9.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nnt-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nnt | ||||||||
| Allele (91) | |||||||||
| Strain | WBStrain00001362 | ||||||||
| WBStrain00031635 | |||||||||
| WBStrain00035473 | |||||||||
| WBStrain00035476 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (32) | |||||||||
| Structured_description | Concise_description | nnt-1 encodes a proton-pumping nicotinamide nucleotide transhydrogenase predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| WBPaper00005552 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable NAD(P)+ transhydrogenase activity and NADP binding activity. Predicted to be involved in NADPH regeneration. Located in mitochondrion. Expressed in ganglia; intestine; pharyngeal-intestinal valve; and somatic nervous system. Human ortholog(s) of this gene implicated in familial glucocorticoid deficiency. Is an ortholog of human NNT (nicotinamide nucleotide transhydrogenase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080620 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7863) | ||||
| Molecular_info | Corresponding_CDS | C15H9.1 | |||||||
| Corresponding_transcript | C15H9.1.1 | ||||||||
| Other_sequence (79) | |||||||||
| Associated_feature | WBsf662865 | ||||||||
| WBsf662866 | |||||||||
| WBsf1005484 | |||||||||
| WBsf1005485 | |||||||||
| WBsf1023060 | |||||||||
| WBsf235801 | |||||||||
| WBsf235802 | |||||||||
| WBsf235803 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010802 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002414 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040628 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078166 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram12 | ||||||||
| Expr5271 | |||||||||
| Expr10728 | |||||||||
| Expr11937 | |||||||||
| Expr1015420 | |||||||||
| Expr1031767 | |||||||||
| Expr1144685 | |||||||||
| Expr2014342 | |||||||||
| Expr2032583 | |||||||||
| Drives_construct | WBCnstr00002251 | ||||||||
| WBCnstr00002252 | |||||||||
| WBCnstr00007832 | |||||||||
| WBCnstr00019739 | |||||||||
| WBCnstr00035871 | |||||||||
| Construct_product | WBCnstr00035871 | ||||||||
| Regulate_expr_cluster | WBPaper00025185:nnt-1_downregulated | ||||||||
| WBPaper00025185:nnt-1_upregulated | |||||||||
| Antibody | WBAntibody00001862 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (293) | |||||||||
| Interaction (45) | |||||||||
| Map_info | Map | X | Position | -3.68202 | Error | 0.025708 | |||
| Positive | Positive_clone | C15H9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4540 | |||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Sequence connection from [Arkblad E]. krb 13/11/01 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
