WormBase Tree Display for Gene: WBGene00003759
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| WBGene00003759 | SMap | S_parent | Sequence | Y47D3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | nlp-21 | Person_evidence | WBPerson242 | |||||
| Sequence_name | Y47D3B.2 | ||||||||
| Molecular_name | Y47D3B.2a | ||||||||
| Y47D3B.2a.1 | |||||||||
| CE19175 | |||||||||
| Y47D3B.2b | |||||||||
| CE24343 | |||||||||
| Y47D3B.2b.1 | |||||||||
| Other_name | CELE_Y47D3B.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | nlp-21 | ||||||||
| DB_info | Database | AceView | gene | 3M478 | |||||
| WormQTL | gene | WBGene00003759 | |||||||
| WormFlux | gene | WBGene00003759 | |||||||
| NDB | locus_tag | CELE_Y47D3B.2 | |||||||
| NCBI | gene | 176570 | |||||||
| RefSeq | protein | NM_067065.6 | |||||||
| NM_001372660.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF316998 | |||||||
| TrEMBL | UniProtAcc | Q9XX02 | |||||||
| Q9U2B9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XX02 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nlp | ||||||||
| Allele (102) | |||||||||
| Strain | WBStrain00055332 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099062 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Concise_description | nlp-21 encodes nine predicted neuropeptide-like proteins; in C. elegans, nlp-21 is part of the GGARAF neuropeptide family that also contains nlp-9; nlp-21 is expressed in a variety of neurons, including AFD, five head neurons, the ventral nerve cord, one anterior pharyngeal neuron, and one tail neuron; nlp-21 expression is also detected in the embryo and the intestine; NLP-21 is tranported by dense core vesicles to the plasma membrane where it is released into the body cavity. | Paper_evidence | WBPaper00004403 | |||||
| WBPaper00004975 | |||||||||
| WBPaper00005654 | |||||||||
| WBPaper00028820 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 06 Jun 2012 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in neuropeptide signaling pathway. Expressed in body wall musculature; dorsal nerve cord; intestine; and neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47D3B.2a | |||||||
| Y47D3B.2b | |||||||||
| Corresponding_transcript | Y47D3B.2a.1 | ||||||||
| Y47D3B.2b.1 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf651507 | ||||||||
| WBsf994370 | |||||||||
| WBsf1015991 | |||||||||
| WBsf227572 | |||||||||
| WBsf227573 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006726 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056769 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037168 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094974 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020702 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090622 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1714 | ||||||||
| Expr4867 | |||||||||
| Expr7937 | |||||||||
| Expr10035 | |||||||||
| Expr1014966 | |||||||||
| Expr1031757 | |||||||||
| Expr1160225 | |||||||||
| Expr2014286 | |||||||||
| Expr2032526 | |||||||||
| Drives_construct | WBCnstr00009861 | ||||||||
| WBCnstr00010408 | |||||||||
| WBCnstr00012295 | |||||||||
| WBCnstr00013011 | |||||||||
| Construct_product | WBCnstr00001347 | ||||||||
| WBCnstr00005794 | |||||||||
| WBCnstr00005795 | |||||||||
| WBCnstr00005797 | |||||||||
| WBCnstr00009760 | |||||||||
| WBCnstr00017379 | |||||||||
| WBCnstr00040001 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (241) | |||||||||
| Interaction (109) | |||||||||
| Map_info | Map | III | Position | 9.0883 | Error | 0.113676 | |||
| Positive | Positive_clone | Y47D3B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
