WormBase Tree Display for Gene: WBGene00003759
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WBGene00003759 | SMap | S_parent | Sequence | Y47D3B | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nlp | ||||||
Allele (102) | |||||||
Strain | WBStrain00055332 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00099062 | ||||||
Ortholog (23) | |||||||
Structured_description | Concise_description | nlp-21 encodes nine predicted neuropeptide-like proteins; in C. elegans, nlp-21 is part of the GGARAF neuropeptide family that also contains nlp-9; nlp-21 is expressed in a variety of neurons, including AFD, five head neurons, the ventral nerve cord, one anterior pharyngeal neuron, and one tail neuron; nlp-21 expression is also detected in the embryo and the intestine; NLP-21 is tranported by dense core vesicles to the plasma membrane where it is released into the body cavity. | Paper_evidence | WBPaper00004403 | |||
WBPaper00004975 | |||||||
WBPaper00005654 | |||||||
WBPaper00028820 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 06 Jun 2012 00:00:00 | ||||||
Automated_description | Predicted to be involved in neuropeptide signaling pathway. Expressed in body wall musculature; dorsal nerve cord; intestine; and neurons. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y47D3B.2a | |||||
Y47D3B.2b | |||||||
Corresponding_transcript | Y47D3B.2a.1 | ||||||
Y47D3B.2b.1 | |||||||
Other_sequence (24) | |||||||
Associated_feature | WBsf651507 | ||||||
WBsf994370 | |||||||
WBsf1015991 | |||||||
WBsf227572 | |||||||
WBsf227573 | |||||||
Experimental_info | RNAi_result | WBRNAi00006726 | Inferred_automatically | RNAi_primary | |||
WBRNAi00056769 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037168 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00094974 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020702 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00090622 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1714 | ||||||
Expr4867 | |||||||
Expr7937 | |||||||
Expr10035 | |||||||
Expr1014966 | |||||||
Expr1031757 | |||||||
Expr1160225 | |||||||
Expr2014286 | |||||||
Expr2032526 | |||||||
Drives_construct | WBCnstr00009861 | ||||||
WBCnstr00010408 | |||||||
WBCnstr00012295 | |||||||
WBCnstr00013011 | |||||||
Construct_product | WBCnstr00001347 | ||||||
WBCnstr00005794 | |||||||
WBCnstr00005795 | |||||||
WBCnstr00005797 | |||||||
WBCnstr00009760 | |||||||
WBCnstr00017379 | |||||||
WBCnstr00040001 | |||||||
Microarray_results (27) | |||||||
Expression_cluster (241) | |||||||
Interaction (109) | |||||||
Map_info | Map | III | Position | 9.0883 | Error | 0.113676 | |
Positive | Positive_clone | Y47D3B | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (14) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |