WormBase Tree Display for Gene: WBGene00003745

WBGene00003745 SMap: S_parent: Sequence: F18E9
  Identity: Version: 1
    Name: CGC_name: nlp-7 Person_evidence: WBPerson242
      Sequence_name: F18E9.2
      Molecular_name: F18E9.2a
        F18E9.2a.1
        CE02659
        F18E9.2b
        CE47167
        F18E9.2b.1
      Other_name: CELE_F18E9.2 Accession_evidence: NDB BX284606
      Public_name: nlp-7
    DB_info: Database: AceView gene XJ209
        WormQTL gene WBGene00003745
        WormFlux gene WBGene00003745
        NDB locus_tag CELE_F18E9.2
        NCBI gene 184647
        RefSeq protein NM_001270134.3
            NM_001270133.4
        SwissProt UniProtAcc Q19569
        UniProt_GCRP UniProtAcc Q19569
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nlp
    Allele (31)
    Strain: WBStrain00055183
    RNASeq_FPKM (74)
    GO_annotation: 00065198
      00065199
      00065200
      00065201
      00065202
      00065203
      00065204
      00065205
      00065206
    Ortholog: WBGene00065532 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00041279 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00158862 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00208555 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g3401 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6808 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g695 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g16253 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4599 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19085 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13522 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16472 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g27049 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2597 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g2600 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00357.g9682 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g25490 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10983 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00858.g16167 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_02049 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025270 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_X0168200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19609 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Involved in several processes, including determination of adult lifespan; positive regulation of egg-laying behavior; and response to caloric restriction. Expressed in egg-laying apparatus and nervous system. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F18E9.2a
      F18E9.2b
    Corresponding_transcript: F18E9.2a.1
      F18E9.2b.1
    Other_sequence: CBC04703_1
    Associated_feature: WBsf1006200
      WBsf1023441
      WBsf236072
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1017
      Expr1701
      Expr10682
      Expr11112
      Expr13338
      Expr1010845
      Expr1148925
      Expr2014324
      Expr2032565
    Drives_construct: WBCnstr00001955
      WBCnstr00010026
      WBCnstr00010394
      WBCnstr00017453
      WBCnstr00018508
      WBCnstr00035898
    Construct_product: WBCnstr00010026
      WBCnstr00018508
      WBCnstr00035898
    Microarray_results (21)
    Expression_cluster: WBPaper00024505:pharyngeal_enriched
      WBPaper00032976:dosage_compensated_genes
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_larva_enriched
      WBPaper00037950:PVD-OLL-neurons_larva_SelectivelyEnriched
      WBPaper00040560:hpl-2_embryo_upregulated
      WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
      WBPaper00044037:eat-2_upregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045417:128Q-huntingtin_downreglated
      WBPaper00045934:wrn-1(gk99)_downregulated
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051265:F4_hrde-1(tm1200)_downregulated
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055648:male-CEM-neurons_expressed
      WBPaper00055648:male-tail_expressed
      WBPaper00055648:vulva-uterus_expressed
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:ADL
      WBPaper00061340:AFD
      WBPaper00061340:AIZ
      WBPaper00061340:ASE
      WBPaper00061340:AWC
      WBPaper00061340:PVP
      WBPaper00061340:PVT
      WBPaper00061527:ccg-1_12351-ZC410.5
      WBPaper00061651:ADL_enriched
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:ALM_enriched
      WBPaper00061651:ASER_enriched
      WBPaper00061651:AUA_enriched
      WBPaper00061651:AWC_ON_enriched
      WBPaper00061651:I2_enriched
      WBPaper00061651:I3_enriched
      WBPaper00061651:PHA_enriched
      WBPaper00061651:PLM_enriched
      WBPaper00061651:PVP_enriched
      WBPaper00061651:RIP_enriched
      WBPaper00061651:VC_4_5_enriched
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064871:hypoxia_downregulated_F2
      WBPaper00065158:25C_vs_15C_upregulated_AFD
      WBPaper00065258:anchor-cell_enriched
      WBPaper00065623:159
      WBPaper00065841:14_0
      WBPaper00065841:14_2
      WBPaper00065841:20_0
      WBPaper00065841:20_2
      WBPaper00065841:35_3
      WBPaper00065841:47_0
      WBPaper00065841:48_0
      WBPaper00065841:50_0
      WBPaper00065841:58_0
      WBPaper00065841:58_1
      WBPaper00065841:87_0
      WBPaper00065841:90_0
      WBPaper00065841:132_0
      WBPaper00065841:145_0
      WBPaper00065841:146_0
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      cgc4489_group_12
      WBPaper00024671:AFD_vs_AWB_upregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00028564:CeMM_vs_NGM_upregulated
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00032948:StarveUp4
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035424:ASER_up
      WBPaper00036286:Pattern_D
      WBPaper00037113:Chlorpyrifos_Diazinon_16C_regulated
      WBPaper00037695:LD_3-day
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040184:hcf-1up_sir-2.1down_daf-2nc
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040876:mir-35_downregulated
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00056330:mrps-5(RNAi)_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
    Interaction (43)
  Map_info: Map: X Position: 0.154957 Error: 0.011167
    Positive: Positive_clone: F18E9 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5495
    Pseudo_map_position
  Reference (18)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene