WormBase Tree Display for Gene: WBGene00003724
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WBGene00003724 | SMap | S_parent | Sequence | F44C8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | nhr-134 | Person_evidence | WBPerson600 | |||||
Sequence_name | F44C8.2 | ||||||||
Molecular_name | F44C8.2 | ||||||||
F44C8.2.1 | |||||||||
CE17823 | |||||||||
Other_name | CELE_F44C8.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-134 | ||||||||
DB_info | Database | AceView | gene | 5C711 | |||||
WormQTL | gene | WBGene00003724 | |||||||
WormFlux | gene | WBGene00003724 | |||||||
NDB | locus_tag | CELE_F44C8.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003724|UniProtKB=O16361 | |||||||
family | PTHR45680 | ||||||||
NCBI | gene | 185728 | |||||||
RefSeq | protein | NM_071209.7 | |||||||
SwissProt | UniProtAcc | O16361 | |||||||
UniProt_GCRP | UniProtAcc | O16361 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (45) | |||||||||
Strain | WBStrain00036620 | ||||||||
WBStrain00036681 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00027922 | ||||||||
00027923 | |||||||||
00027924 | |||||||||
00027925 | |||||||||
00111693 | |||||||||
00111694 | |||||||||
00111695 | |||||||||
00111696 | |||||||||
Contained_in_operon | CEOP5028 | ||||||||
Ortholog (36) | |||||||||
Paralog (217) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F44C8.2 | |||||||
Corresponding_transcript | F44C8.2.1 | ||||||||
Other_sequence | CBC13912_1 | ||||||||
Associated_feature | WBsf646698 | ||||||||
WBsf978436 | |||||||||
WBsf999480 | |||||||||
WBsf999481 | |||||||||
WBsf1019275 | |||||||||
WBsf1019276 | |||||||||
WBsf231489 | |||||||||
Transcription_factor | WBTranscriptionFactor000274 | ||||||||
Experimental_info | RNAi_result | WBRNAi00047265 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014916 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032226 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025038 | ||||||||
Expr1031736 | |||||||||
Expr1151120 | |||||||||
Expr2014034 | |||||||||
Expr2032274 | |||||||||
Drives_construct | WBCnstr00035917 | ||||||||
Construct_product | WBCnstr00035917 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (86) | |||||||||
Interaction | WBInteraction000185065 | ||||||||
WBInteraction000243077 | |||||||||
WBInteraction000386152 | |||||||||
Map_info | Map | V | Position | -15.2048 | Error | 0.007409 | |||
Positive | Positive_clone | F44C8 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5202 | |||||||
5378 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027309 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |