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WormBase Tree Display for Gene: WBGene00003724

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Name Class

WBGene00003724SMapS_parentSequenceF44C8
IdentityVersion1
NameCGC_namenhr-134Person_evidenceWBPerson600
Sequence_nameF44C8.2
Molecular_nameF44C8.2
F44C8.2.1
CE17823
Other_nameCELE_F44C8.2Accession_evidenceNDBBX284605
Public_namenhr-134
DB_infoDatabaseAceViewgene5C711
WormQTLgeneWBGene00003724
WormFluxgeneWBGene00003724
NDBlocus_tagCELE_F44C8.2
PanthergeneCAEEL|WormBase=WBGene00003724|UniProtKB=O16361
familyPTHR45680
NCBIgene185728
RefSeqproteinNM_071209.7
SwissProtUniProtAccO16361
UniProt_GCRPUniProtAccO16361
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:32WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (45)
StrainWBStrain00036620
WBStrain00036681
RNASeq_FPKM (74)
GO_annotation00027922
00027923
00027924
00027925
00111693
00111694
00111695
00111696
Contained_in_operonCEOP5028
OrthologWBGene00056671Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00024504Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00024503Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00024505Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00136086Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00153129Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00223242Brugia malayiFrom_analysisWormBase-Compara
CSP26.g3978Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g3979Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g3980Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g6162Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g6163Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8449Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g8451Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g8452Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2361Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g2363Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2772Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11806Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g11809Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17401Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6351Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6352Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18272Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g18273Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00199.g6822Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g17838Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g17839Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold566.g4113Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02513.g26795Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02513.g26796Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_019993Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_50037100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g13423Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242085Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00288616Trichuris murisFrom_analysisWormBase-Compara
Paralog (217)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF44C8.2
Corresponding_transcriptF44C8.2.1
Other_sequenceCBC13912_1
Associated_featureWBsf646698
WBsf978436
WBsf999480
WBsf999481
WBsf1019275
WBsf1019276
WBsf231489
Transcription_factorWBTranscriptionFactor000274
Experimental_infoRNAi_resultWBRNAi00047265Inferred_automaticallyRNAi_primary
WBRNAi00014916Inferred_automaticallyRNAi_primary
WBRNAi00032226Inferred_automaticallyRNAi_primary
Expr_patternExpr1025038
Expr1031736
Expr1151120
Expr2014034
Expr2032274
Drives_constructWBCnstr00035917
Construct_productWBCnstr00035917
Microarray_results (19)
Expression_cluster (86)
InteractionWBInteraction000185065
WBInteraction000243077
WBInteraction000386152
Map_infoMapVPosition-15.2048Error0.007409
PositivePositive_cloneF44C8Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point5202
5378
Pseudo_map_position
ReferenceWBPaper00027309
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene