WormBase Tree Display for Gene: WBGene00003565

WBGene00003565 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 1
    Name: CGC_name: ncs-3
      Sequence_name: K03E6.3
      Molecular_name: K03E6.3
        K03E6.3.1
        CE30288
      Other_name: CELE_K03E6.3 Accession_evidence: NDB BX284606
      Public_name: ncs-3
    DB_info: Database: AceView gene XB675
        WormQTL gene WBGene00003565
        WormFlux gene WBGene00003565
        NDB locus_tag CELE_K03E6.3
        Panther gene CAEEL|WormBase=WBGene00003565|UniProtKB=Q95ZR9
          family PTHR23055
        NCBI gene 186953
        RefSeq protein NM_075800.6
        TrEMBL UniProtAcc Q95ZR9
        UniProt_GCRP UniProtAcc Q95ZR9
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ncs
    Allele (43)
    RNASeq_FPKM (74)
    GO_annotation: 00090197
      00111142
    Ortholog: WBGene00060182 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029932 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00164539 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00096460 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00145924 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00122888 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
      WBGene00060196 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00269148 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3362 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14603 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g818 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP29.g541 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6163 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g6045 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00156.g5803 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-ncs-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00564.g12938 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03160 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_022254 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g11107 Panagrellus redivivus From_analysis: WormBase-Compara
      chrX_pilon.g18375 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239968 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00256624 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00296384 Trichuris muris From_analysis: WormBase-Compara
      WBGene00302359 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000002781 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00003563 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003564 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008998 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015867 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021116 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008307 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007710 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: ncs-3 encodes a neuronal calcium sensor (NCS) protein with no obvious null phenotype. Paper_evidence: WBPaper00004225
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable calcium ion binding activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K03E6.3
    Corresponding_transcript: K03E6.3.1
    Other_sequence (11)
    Associated_feature: WBsf718499
      WBsf1003929
      WBsf1003930
      WBsf1022204
      WBsf1022205
      WBsf235305
      WBsf235306
  Experimental_info: RNAi_result: WBRNAi00049835 Inferred_automatically: RNAi_primary
      WBRNAi00016546 Inferred_automatically: RNAi_primary
      WBRNAi00033918 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027181
      Expr1153548
      Expr2013912
      Expr2032152
    Drives_construct: WBCnstr00036039
    Construct_product: WBCnstr00036039
    Microarray_results (19)
    Expression_cluster (107)
    Interaction (14)
  Map_info: Map: X Position: -18.7803
    Positive: Positive_clone: K03E6 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004225
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene