WormBase Tree Display for Gene: WBGene00003375
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| WBGene00003375 | Evidence | Person_evidence | WBPerson415 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_III | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mlp-1 | Person_evidence | WBPerson910 | |||||
| Sequence_name | T04C9.4 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_T04C9.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | mlp-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mlp | ||||||||
| Allele (55) | |||||||||
| Strain | WBStrain00001691 | ||||||||
| WBStrain00002272 | |||||||||
| WBStrain00031656 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022583 | ||||||||
| 00022584 | |||||||||
| 00022585 | |||||||||
| 00022586 | |||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00015216 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00017644 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | mlp-1 encodes a LIM domain-containing protein that is a member of the MLP/CRP family of muscle LIM domain proteins. | Paper_evidence | WBPaper00024208 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 19 Jun 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable metal ion binding activity. Located in striated muscle dense body. Human ortholog(s) of this gene implicated in dilated cardiomyopathy 1M and hypertrophic cardiomyopathy 12. Is an ortholog of human CSRP1 (cysteine and glycine rich protein 1); CSRP2 (cysteine and glycine rich protein 2); and CSRP3 (cysteine and glycine rich protein 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:11984 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2472) | ||||
| DOID:0110449 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2472) | ||||||
| DOID:12930 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2472) | ||||||
| DOID:0110318 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2472) | ||||||
| Molecular_info | Corresponding_CDS | T04C9.4a | |||||||
| T04C9.4b | |||||||||
| T04C9.4c | |||||||||
| T04C9.4d | |||||||||
| Corresponding_CDS_history | T04C9.4:wp33 | ||||||||
| T04C9.4a:wp82 | |||||||||
| T04C9.4b:wp82 | |||||||||
| T04C9.4c:wp82 | |||||||||
| T04C9.4c:wp236 | |||||||||
| T04C9.4c:wp275 | |||||||||
| Corresponding_transcript | T04C9.4a.1 | ||||||||
| T04C9.4a.2 | |||||||||
| T04C9.4a.3 | |||||||||
| T04C9.4b.1 | |||||||||
| T04C9.4c.1 | |||||||||
| T04C9.4c.2 | |||||||||
| T04C9.4d.1 | |||||||||
| Other_sequence (130) | |||||||||
| Associated_feature | WBsf666463 | ||||||||
| WBsf666943 | |||||||||
| WBsf666944 | |||||||||
| WBsf717910 | |||||||||
| WBsf717911 | |||||||||
| WBsf992591 | |||||||||
| WBsf226745 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00002515 | ||||||||
| WBCnstr00002663 | |||||||||
| WBCnstr00004365 | |||||||||
| WBCnstr00004366 | |||||||||
| WBCnstr00036152 | |||||||||
| Construct_product | WBCnstr00013958 | ||||||||
| WBCnstr00036152 | |||||||||
| Microarray_results (40) | |||||||||
| Expression_cluster (237) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | III | Position | -1.42778 | Error | 0.000247 | |||
| Positive | Positive_clone | T04C9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4546 | |||||||
| 4769 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024208 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
