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WormBase Tree Display for Gene: WBGene00002977

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Name Class

WBGene00002977SMapS_parentSequenceY105E8A
IdentityVersion2
NameCGC_namelev-10
Sequence_nameY105E8A.7
Molecular_nameY105E8A.7a
Y105E8A.7a.1
CE29845
Y105E8A.7b
CE36334
Y105E8A.7e
CE43607
Y105E8A.7b.1
Y105E8A.7e.1
Other_name1O991Inferred_automatically
Date_last_updated15 Apr 2005 00:00:00
Y105E8E.fCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_LEV-10Accession_evidenceNDBBX284601
Public_namelev-10
DB_infoDatabaseAceViewgene1O991
WormFluxgeneWBGene00002977
NDBlocus_tagCELE_LEV-10
PanthergeneCAEEL|WormBase=WBGene00002977|UniProtKB=G5EDX3
familyPTHR45645
NCBIgene24105310
RefSeqproteinNM_001265420.4
NM_001026520.5
NM_001373661.2
TREEFAMTREEFAM_IDTF318542
TrEMBLUniProtAccG5EER3
C0Z3M3
G5EDX3
UniProt_GCRPUniProtAccG5EDX3
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:30WBPerson1971EventImportedInitial conversion from geneace
223 Jul 2004 14:58:35WBPerson1983Name_changeSequence_nameY105E8A.7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlev
Reference_alleleWBVar00275212
Allele (215)
StrainWBStrain00031835
WBStrain00032391
WBStrain00040922
WBStrain00007198
WBStrain00047366
WBStrain00047364
WBStrain00047367
RNASeq_FPKM (74)
GO_annotation00006719
00006720
00006721
00006722
00014960
OrthologWBGene00060869Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00164682Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00141097Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00160332Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151657Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00133332Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00060831Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00067660Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00030484Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00090807Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00227495Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12225Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1587Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5851Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8302Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13424Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23591Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1824Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11061Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1575Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g4678Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00676.g13370Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-lev-10Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19053Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00639.g13887Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09157Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001477Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12071Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1044Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10006800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2908Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238097Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00258507Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285317Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0261262Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Paralog (48)
Structured_descriptionConcise_descriptionlev-10 encodes a CUB and LDLa domain-containing type I transmembrane protein; LEV-10 activity is required cell autonomously in muscle cells for clustering of post-synaptic UNC-29-containing ionotropic acetylcholine receptors (AChR); when expressed in body wall muscles, LEV-10 localizes to cholinergic neuromuscular junctions; the LEV-10 extracellular region is sufficient for rescue of AChR clustering.Paper_evidenceWBPaper00000484
WBPaper00024414
Curator_confirmedWBPerson1843
Date_last_updated04 Jun 2008 00:00:00
Automated_descriptionLocated in membrane; synapse; and varicosity. Expressed in amphid neurons; head neurons; phasmid neurons; reproductive system; and ventral nerve cord.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY105E8A.7a
Y105E8A.7b
Y105E8A.7e
Corresponding_CDS_historyY105E8A.30a:wp128
Y105E8A.30b:wp128
Corresponding_transcriptY105E8A.7a.1
Y105E8A.7b.1
Y105E8A.7e.1
Other_sequenceEY462982.1
GT571380.1
GPC01279_1
MI01984
SRC08597_1
FC809924.1
DA04905
MPC00013_1
Associated_feature (18)
Experimental_infoRNAi_resultWBRNAi00089877Inferred_automaticallyRNAi_primary
WBRNAi00036499Inferred_automaticallyRNAi_primary
WBRNAi00106860Inferred_automaticallyRNAi_primary
WBRNAi00004484Inferred_automaticallyRNAi_primary
WBRNAi00090195Inferred_automaticallyRNAi_primary
WBRNAi00090037Inferred_automaticallyRNAi_primary
WBRNAi00089866Inferred_automaticallyRNAi_primary
Expr_patternExpr3455
Expr16343
Expr1031377
Expr1158772
Expr2013083
Expr2031315
Drives_constructWBCnstr00042963
AntibodyWBAntibody00000766
WBAntibody00000767
WBAntibody00001989
Microarray_results (32)
Expression_cluster (133)
InteractionWBInteraction000052952
WBInteraction000501249
WBInteraction000501546
WBInteraction000504039
WBInteraction000504745
WBInteraction000518492
WBInteraction000518493
WBInteraction000524392
WBInteraction000540194
WBInteraction000540251
Map_infoPositivePositive_cloneY105E8AInferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point211
212
213
6107
Multi_point203
3242
202
249
2176
2177
Pos_neg_data (13)
Interpolated_map_positionI24.6833
Reference (46)
RemarkThis single locus has two gene products, lev-10 and eat-18
MethodGene