WormBase Tree Display for Gene: WBGene00002205
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| WBGene00002205 | SMap | S_parent | Sequence | W04G5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | kin-23 | ||||||||
| Sequence_name | W04G5.6 | |||||||||
| Molecular_name | W04G5.6 | |||||||||
| Other_name | CELE_W04G5.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | kin-23 | |||||||||
| DB_info | Database | AceView | gene | 1M232 | ||||||
| WormQTL | gene | WBGene00002205 | ||||||||
| WormFlux | gene | WBGene00002205 | ||||||||
| NDB | locus_tag | CELE_W04G5.6 | ||||||||
| NCBI | gene | 173050 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 21 Oct 2019 15:23:25 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | kin | |||||||||
| Allele (38) | ||||||||||
| Strain | WBStrain00031615 | |||||||||
| WBStrain00035738 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (12) | ||||||||||
| Paralog (69) | ||||||||||
| Structured_description | Concise_description | kin-23 encodes a predicted protein tyrosine kinase; like KIN-30, KIN-23 contains an unusual K to R substitution in kinase subdomain VII; kin-23 mRNA is expressed strongly during the L1/L2 larval stages, weakly in L3 and L4 stages, and at undetectable levels in adults. | Paper_evidence | WBPaper00003205 | ||||||
| Curator_confirmed | WBPerson1843 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Enriched in head mesodermal cell based on RNA-seq studies. Is affected by several genes including daf-16; daf-12; and sir-2.1 based on tiling array; RNA-seq; and microarray studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | W04G5.6:wp47 | ||||||||
| W04G5.6:wp52 | ||||||||||
| W04G5.6:wp220 | ||||||||||
| W04G5.6:wp274 | ||||||||||
| Corresponding_pseudogene | W04G5.6 | |||||||||
| Other_sequence | XI00529 | |||||||||
| XIC02958_1 | ||||||||||
| Experimental_info | Expr_pattern | Expr602 | ||||||||
| Expr1158335 | ||||||||||
| Expr2012934 | ||||||||||
| Drives_construct | WBCnstr00036388 | |||||||||
| Construct_product | WBCnstr00036388 | |||||||||
| Microarray_results (12) | ||||||||||
| Expression_cluster (50) | ||||||||||
| Interaction (17) | ||||||||||
| Map_info | Map | I | Position | 9.4599 | Error | 0.036856 | ||||
| Positive | Positive_clone | W04G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Mapping_data | Multi_point | 4460 | ||||||||
| 4467 | ||||||||||
| 5610 | ||||||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00003205 | |||||||||
| WBPaper00027258 | ||||||||||
| WBPaper00038491 | ||||||||||
| WBPaper00055090 | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
