WormBase Tree Display for Gene: WBGene00002043
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| WBGene00002043 | SMap | S_parent | Sequence | C09G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hyl-1 | |||||||
| Sequence_name | C09G4.1 | ||||||||
| Molecular_name | C09G4.1a | ||||||||
| C09G4.1a.1 | |||||||||
| CE27675 | |||||||||
| C09G4.1b | |||||||||
| CE49712 | |||||||||
| C09G4.1c | |||||||||
| CE53915 | |||||||||
| C09G4.1b.1 | |||||||||
| C09G4.1c.1 | |||||||||
| Other_name | LAG1-1 | Accession_evidence | EMBL | AF105010 | |||||
| CELE_C09G4.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | hyl-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hyl | ||||||||
| Allele (76) | |||||||||
| Strain | WBStrain00031744 | ||||||||
| WBStrain00035687 | |||||||||
| WBStrain00040672 | |||||||||
| WBStrain00040673 | |||||||||
| WBStrain00040674 | |||||||||
| WBStrain00040676 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (51) | |||||||||
| Paralog | WBGene00006505 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00002044 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | hyl-1 encodes a ceramide synthase orthologous to Saccharomyces cerevisiae Lag1p (longevity assurance gene), a protein preferentially expressed in young yeasts; by homology, HYL-1 is predicted to have several possible functions, including regulation of lipid, particularly ceramide, biosynthesis, regulation of lipid transport, and regulation of protein translocation in the endoplasmic reticulum. | Paper_evidence | WBPaper00003354 | |||||
| WBPaper00013113 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 04 Mar 2015 00:00:00 | ||||||||
| Automated_description | Predicted to enable sphingosine N-acyltransferase activity. Involved in regulation of locomotion. Located in axon. Expressed in motor neurons. Is an ortholog of human CERS6 (ceramide synthase 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C09G4.1a | |||||||
| C09G4.1b | |||||||||
| C09G4.1c | |||||||||
| Corresponding_CDS_history | C09G4.1c:wp274 | ||||||||
| Corresponding_transcript | C09G4.1a.1 | ||||||||
| C09G4.1b.1 | |||||||||
| C09G4.1c.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00027871 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040226 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram685 | ||||||||
| Expr5225 | |||||||||
| Expr10612 | |||||||||
| Expr1026607 | |||||||||
| Expr1031197 | |||||||||
| Expr1144299 | |||||||||
| Expr2012657 | |||||||||
| Expr2030893 | |||||||||
| Drives_construct | WBCnstr00002225 | ||||||||
| WBCnstr00036498 | |||||||||
| Construct_product | WBCnstr00017103 | ||||||||
| WBCnstr00036498 | |||||||||
| Regulate_expr_cluster | WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_downregulated | ||||||||
| WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_upregulated | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction (108) | |||||||||
| WBProcess | WBbiopr:00000121 | ||||||||
| WBbiopr:00000137 | |||||||||
| Map_info | Map | IV | Position | 3.90256 | Error | 0.001908 | |||
| Positive | Positive_clone | C09G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4267 | |||||||
| 4430 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (19) | |||||||||
| Picture | WBPicture0000013061 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
