WormBase Tree Display for Gene: WBGene00002002
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| WBGene00002002 | SMap | S_parent | Sequence | K08E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hsb-1 | Person_evidence | WBPerson345 | |||||
| Sequence_name | K08E7.2 | ||||||||
| Molecular_name | K08E7.2 | ||||||||
| K08E7.2.1 | |||||||||
| CE23864 | |||||||||
| K08E7.2.2 | |||||||||
| K08E7.2.3 | |||||||||
| Other_name | CELE_K08E7.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | hsb-1 | ||||||||
| DB_info | Database | AceView | gene | 4N330 | |||||
| WormQTL | gene | WBGene00002002 | |||||||
| WormFlux | gene | WBGene00002002 | |||||||
| NDB | locus_tag | CELE_K08E7.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002002|UniProtKB=Q9U3B7 | |||||||
| family | PTHR19424 | ||||||||
| NCBI | gene | 178208 | |||||||
| RefSeq | protein | NM_001392417.1 | |||||||
| TREEFAM | TREEFAM_ID | TF314005 | |||||||
| TrEMBL | UniProtAcc | Q9U3B7 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U3B7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hsb | ||||||||
| Allele (25) | |||||||||
| Legacy_information | [Kramer JM] hsb for Heat Shock factor Binding protein. Deletion is viable, abnormal, possibly cold-sensitive. Overexpression leads to heat-sensitiviy. Predicted gene K08E7.2 | ||||||||
| Strain | WBStrain00001943 | ||||||||
| WBStrain00005028 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00100081 | ||||||||
| 00100082 | |||||||||
| 00100083 | |||||||||
| 00100084 | |||||||||
| 00100085 | |||||||||
| 00100086 | |||||||||
| 00100087 | |||||||||
| 00100088 | |||||||||
| 00109863 | |||||||||
| Contained_in_operon | CEOP4520 | ||||||||
| Ortholog (27) | |||||||||
| Structured_description | Automated_description | Predicted to enable transcription corepressor activity. Predicted to be involved in cellular heat acclimation. Predicted to be located in cytosol and nucleus. Is an ortholog of human HSBP1 (heat shock factor binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08E7.2 | |||||||
| Corresponding_transcript | K08E7.2.1 | ||||||||
| K08E7.2.2 | |||||||||
| K08E7.2.3 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature | WBsf652303 | ||||||||
| WBsf668436 | |||||||||
| WBsf998161 | |||||||||
| WBsf1018392 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016815 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050303 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034143 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6366 | ||||||||
| Expr1024759 | |||||||||
| Expr1031167 | |||||||||
| Expr1154005 | |||||||||
| Expr2012605 | |||||||||
| Expr2030841 | |||||||||
| Drives_construct | WBCnstr00000357 | ||||||||
| WBCnstr00002731 | |||||||||
| WBCnstr00007251 | |||||||||
| WBCnstr00007252 | |||||||||
| WBCnstr00013708 | |||||||||
| WBCnstr00013714 | |||||||||
| WBCnstr00036529 | |||||||||
| Construct_product | WBCnstr00000357 | ||||||||
| WBCnstr00007147 | |||||||||
| WBCnstr00036529 | |||||||||
| Regulate_expr_cluster | WBPaper00056446:hsb-1(cg116)_downregulated | ||||||||
| WBPaper00056446:hsb-1(cg116)_upregulated | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (67) | |||||||||
| Interaction (77) | |||||||||
| WBProcess | WBbiopr:00000001 | ||||||||
| Map_info | Map | IV | Position | 6.02389 | |||||
| Positive | Positive_clone | K08E7 | Person_evidence | WBPerson345 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 4415 | |||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
