WormBase Tree Display for Gene: WBGene00001887
expand all nodes | collapse all nodes | view schema
| WBGene00001887 | SMap | S_parent | Sequence | ZK131 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | his-13 | Person_evidence | WBPerson160 | |||||
| Sequence_name | ZK131.7 | ||||||||
| Molecular_name | ZK131.7 | ||||||||
| ZK131.7.1 | |||||||||
| CE03253 | |||||||||
| Other_name | CELE_ZK131.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | his-13 | ||||||||
| DB_info | Database | AceView | gene | 2O111 | |||||
| WormFlux | gene | WBGene00001887 | |||||||
| NDB | locus_tag | CELE_ZK131.7 | |||||||
| NCBI | gene | 191672 | |||||||
| RefSeq | protein | NM_064489.1 | |||||||
| SwissProt | UniProtAcc | P08898 | |||||||
| UniProt_GCRP | UniProtAcc | P08898 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | his | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar01498941 | |||||||||
| Legacy_information | [C.elegansII] NMK. Histone type H3. HIS3 cluster. [Roberts et al. 1989; EM] | ||||||||
| In_cluster | HIS3_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00109575 | ||||||||
| 00109576 | |||||||||
| 00109577 | |||||||||
| 00109578 | |||||||||
| Ortholog (144) | |||||||||
| Paralog (22) | |||||||||
| Structured_description | Concise_description | his-13 encodes an H3 histone; his-13 is contained within the histone gene cluster HIS3. | Paper_evidence | WBPaper00001150 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of several human genes including H3C1 (H3 clustered histone 1); H3C3 (H3 clustered histone 3); and H3C4 (H3 clustered histone 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK131.7 | |||||||
| Corresponding_transcript | ZK131.7.1 | ||||||||
| Other_sequence | Dviv_isotig00246 | ||||||||
| FG354250.1 | |||||||||
| Dviv_isotig00243 | |||||||||
| SSC01579_1 | |||||||||
| SS03303 | |||||||||
| Associated_feature | WBsf222395 | ||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr7195 | ||||||||
| Expr1162655 | |||||||||
| Drives_construct | WBCnstr00003907 | ||||||||
| WBCnstr00036624 | |||||||||
| Construct_product | WBCnstr00036624 | ||||||||
| Antibody | WBAntibody00000455 | ||||||||
| WBAntibody00000456 | |||||||||
| WBAntibody00000457 | |||||||||
| WBAntibody00000458 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction (179) | |||||||||
| Map_info | Map | II | Position | 20.3 | |||||
| Positive | Positive_clone | ZK131 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| ZK831 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (8) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
