WormBase Tree Display for Sequence: ZK131
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| ZK131 | DNA | ZK131 | 32424 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (13) | ||||
| CDS_child (101) | ||||||
| Transcript (14) | ||||||
| Nongenomic | yk309d8 | 14064 | 20894 | |||
| PCR_product (68) | ||||||
| Allele (815) | ||||||
| Oligo_set | Aff_ZK131.1 | 29521 | 29210 | |||
| Aff_ZK131.11 | 22161 | 23298 | ||||
| Aff_ZK131.2 | 26356 | 26766 | ||||
| Aff_ZK131.5 | 24517 | 24885 | ||||
| Aff_ZK131.6 | 27727 | 27344 | ||||
| Feature_object (205) | ||||||
| Feature_data | ZK131:Polysome | 1 | 32424 | |||
| ZK131:TranscriptionallyActiveRegion | 1 | 32424 | ||||
| ZK131:ChIPSeqTF | 1 | 32424 | ||||
| ZK131:TRF | 1 | 32424 | ||||
| ZK131:Dust | 1 | 32424 | ||||
| ZK131:inverted | 1 | 32424 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_II | |||
| Overlap_right | F08G2 | 32325 | ||||
| Overlap_left | C01B9 | |||||
| Clone_left_end | F08G2 | 22105 | ||||
| Clone_right_end | C01B9 | 283 | ||||
| ZK131 | 32424 | |||||
| DB_info | Database | EMBL | NDB_AC | Z83245 | ||
| NDB_SV | Z83245.5 | |||||
| DB_remark | [121025] Sequence correction: SNP 0 bases @ 7603 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Steward CA | ||||
| From_laboratory | HX | |||||
| Date_directory | 980312 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | ZK131 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | b444e08c300acab1909a898a3f684349 | ||||
| Status | Finished | 12 Mar 1998 00:00:00 | ||||
| Submitted | 09 Dec 1996 00:00:00 | |||||
| Annotated | 21 Oct 1997 00:00:00 | |||||
| Map | Sequence-II | Ends | Left | 7916 | ||
| Right | 7934 | |||||
| Interpolated_map_position | II | 20.2981 | ||||
| Assembly_tags | Clone left end | 22108 | 22105 | F08G2 | ||
| 104 | 101 | C01B9 | ||||
| annotation | 24433 | 24433 | single read has point mutation G > T | |||
| 25817 | 25817 | single read has T deleted, This is either a mutation in this read, or the read may be misassembled within the tandem repeat | ||||
| 7615 | 7524 | Single stranded region. No cutoff data | ||||
| 29030 | 28709 | Single stranded region within repeat | ||||
| 29626 | 29503 | single read coverage only within tandem repeat | ||||
| 29491 | 29491 | C->G based on e-mail from Suzan Holt | ||||
| Finished Right | 32424 | 32424 | ZK131 | |||
| Clone right end | 32424 | 32421 | zk131 | |||
| Finished Left | 1 | 1 | ZK131 | |||
| Method | Genomic_canonical |
