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WormBase Tree Display for Gene: WBGene00001854

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Name Class

WBGene00001854SMapS_parentSequenceF22F1
IdentityVersion2
NameCGC_namehil-3Person_evidenceWBPerson564
Sequence_nameF22F1.1
Molecular_nameF22F1.1
F22F1.1.1
CE04443
Other_nameH1.3Paper_evidenceWBPaper00004630
CELE_F22F1.1Accession_evidenceNDBBX284606
Public_namehil-3
DB_infoDatabaseAceViewgeneXI779
WormQTLgeneWBGene00001854
WormFluxgeneWBGene00001854
NDBlocus_tagCELE_F22F1.1
PanthergeneCAEEL|WormBase=WBGene00001854|UniProtKB=Q19743
familyPTHR11467
NCBIgene181073
RefSeqproteinNM_076974.6
SwissProtUniProtAccQ19743
UniProt_GCRPUniProtAccQ19743
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
212 Nov 2010 10:32:35WBPerson2970Name_changeOther_nameH1.3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhil
Allele (22)
StrainWBStrain00032070
RNASeq_FPKM (74)
GO_annotation (15)
Ortholog (77)
ParalogWBGene00001852Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001853Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001898Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001855Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001856Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001857Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable double-stranded DNA binding activity and nucleosomal DNA binding activity. Predicted to be involved in chromosome condensation and negative regulation of DNA recombination. Predicted to be located in nucleus. Predicted to be part of nucleosome. Expressed widely. Human ortholog(s) of this gene implicated in acute lymphoblastic leukemia. Is an ortholog of human H1-8 (H1.8 linker histone).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:9952Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4716)
Molecular_infoCorresponding_CDSF22F1.1
Corresponding_transcriptF22F1.1.1
Other_sequence (17)
Associated_featureWBsf648348
WBsf663027
WBsf663028
WBsf1006065
WBsf1006066
WBsf1023374
WBsf1023375
WBsf236025
WBsf236026
WBsf236027
Experimental_infoRNAi_resultWBRNAi00013773Inferred_automaticallyRNAi_primary
WBRNAi00031287Inferred_automaticallyRNAi_primary
WBRNAi00045345Inferred_automaticallyRNAi_primary
WBRNAi00090693Inferred_automaticallyRNAi_primary
Expr_patternExpr568
Expr881
Expr1011005
Expr1031089
Expr1149269
Expr2012416
Expr2030652
Drives_constructWBCnstr00036648
Construct_productWBCnstr00036648
AntibodyWBAntibody00000355
Microarray_results (20)
Expression_cluster (347)
InteractionWBInteraction000110403
WBInteraction000114184
WBInteraction000114192
WBInteraction000158099
WBInteraction000158100
WBInteraction000158101
WBInteraction000158102
WBInteraction000158103
WBInteraction000158104
WBInteraction000158105
WBInteraction000158106
WBInteraction000158107
WBInteraction000158108
WBInteraction000158109
WBInteraction000158110
WBInteraction000158111
WBInteraction000158112
WBInteraction000158113
WBInteraction000158114
WBInteraction000158115
WBInteraction000158116
WBInteraction000158117
WBInteraction000158118
WBInteraction000158119
WBInteraction000158121
WBInteraction000158152
WBInteraction000158243
WBInteraction000158252
WBInteraction000158259
WBInteraction000158263
WBInteraction000158272
WBInteraction000158277
WBInteraction000158290
WBInteraction000158296
WBInteraction000158305
WBInteraction000158312
WBInteraction000158336
WBInteraction000164407
WBInteraction000169265
WBInteraction000169266
WBInteraction000169267
WBInteraction000169268
WBInteraction000169269
WBInteraction000169270
WBInteraction000169271
WBInteraction000169272
WBInteraction000169273
WBInteraction000169274
WBInteraction000169275
WBInteraction000169337
WBInteraction000169344
WBInteraction000169357
WBInteraction000169366
WBInteraction000169385
WBInteraction000173230
WBInteraction000174129
WBInteraction000268902
WBInteraction000284696
WBInteraction000291123
WBInteraction000350991
WBInteraction000354325
WBInteraction000362566
WBInteraction000399839
WBInteraction000409843
WBInteraction000423740
WBInteraction000431400
WBInteraction000450327
WBInteraction000459698
WBInteraction000552536
WBInteraction000553482
WBInteraction000553644
WBInteraction000580036
Map_infoMapXPosition-0.42571Error0.028038
PositivePositive_cloneF22F1Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4876
4189
4404
5663
Pseudo_map_position
ReferenceWBPaper00002044
WBPaper00004630
WBPaper00030574
WBPaper00038491
WBPaper00046427
WBPaper00055090
WBPaper00064787
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene