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WormBase Tree Display for Gene: WBGene00001853

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Name Class

WBGene00001853SMapS_parentSequenceY73B6BL
IdentityVersion2
NameCGC_namehil-2Person_evidenceWBPerson564
Sequence_nameY73B6BL.9
Molecular_nameY73B6BL.9a
Y73B6BL.9a.1
CE47059
Y73B6BL.9b
CE46839
Y73B6BL.9b.1
Other_nameH1.2Paper_evidenceWBPaper00004630
CELE_Y73B6BL.9Accession_evidenceNDBBX284604
Public_namehil-2
DB_infoDatabaseAceViewgene4H59
WormQTLgeneWBGene00001853
WormFluxgeneWBGene00001853
NDBlocus_tagCELE_Y73B6BL.9
PanthergeneCAEEL|WormBase=WBGene00001853|UniProtKB=P15796
familyPTHR11467
NCBIgene177390
RefSeqproteinNM_001383102.2
NM_171909.8
SwissProtUniProtAccP15796
UniProt_GCRPUniProtAccP15796
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
212 Nov 2010 10:32:35WBPerson2970Name_changeOther_nameH1.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhil
Allele (34)
StrainWBStrain00037394
RNASeq_FPKM (74)
GO_annotation (15)
OrthologWBGene00058789Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WBGene00103491Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00029507Caenorhabditis briggsaeFrom_analysisOMA
WBGene00143293Caenorhabditis brenneriFrom_analysisOMA
WormBase-Compara
WBGene00088372Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CSP21.g5230Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP32.g10335Caenorhabditis sulstoniFrom_analysisWormBase-Compara
Cnig_chr_V.g17385Caenorhabditis nigoniFrom_analysisWormBase-Compara
Sp34_40284800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0158600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10590Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244699Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249453Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00099312Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257205Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000006048Saccharomyces cerevisiaeFrom_analysisHieranoid
Inparanoid
OrthoFinder
Panther
FB:FBgn0051617Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053807Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053861Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053852Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053816Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053804Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053813Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053810Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053828Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053834Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053849Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053819Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053855Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053843Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053801Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053831Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053837Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053840Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053864Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053858Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053822Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053846Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
FB:FBgn0053825Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-030131-337Danio rerioFrom_analysisEnsEMBL-Compara
OMA
OrthoInspector
Panther
ZFIN:ZDB-GENE-050320-42Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-050417-145Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-050522-103Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-030131-5155Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-131126-58Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-160113-46Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-160113-58Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-160113-52Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-121214-122Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-060825-170Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-121214-116Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-160113-29Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-131127-5Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-131127-26Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-131121-2Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-160113-38Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ZFIN:ZDB-GENE-160113-41Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
HGNC:4714Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoInspector
Panther
HGNC:4720Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
HGNC:18463Homo sapiensFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
SonicParanoid
MGI:95893Mus musculusFrom_analysisEnsEMBL-Compara
OrthoInspector
Panther
MGI:2176207Mus musculusFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
RGD:2777Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoInspector
Panther
RGD:2776Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
RGD:1305706Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
RGD:1566236Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
Panther
RGD:1590638Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
RGD:1587893Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
RGD:1585568Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
ParalogWBGene00001852Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001898Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001854Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001856Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001857Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001855Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable double-stranded DNA binding activity and nucleosomal DNA binding activity. Predicted to be involved in chromosome condensation and negative regulation of DNA recombination. Predicted to be located in nucleus. Predicted to be part of nucleosome. Is an ortholog of human H1-8 (H1.8 linker histone).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY73B6BL.9a
Y73B6BL.9b
Corresponding_CDS_historyY73B6BL.9a:wp229
Y73B6BL.9b:wp229
Corresponding_transcriptY73B6BL.9a.1
Y73B6BL.9b.1
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00076027Inferred_automaticallyRNAi_primary
WBRNAi00027720Inferred_automaticallyRNAi_primary
WBRNAi00058346Inferred_automaticallyRNAi_primary
Expr_patternExpr1031088
Expr1161763
Expr2012415
Expr2030651
Microarray_results (20)
Expression_cluster (286)
Interaction (64)
Map_infoMapIVPosition3.13735
PositivePositive_cloneY73B6BLInferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4839
4803
Pseudo_map_position
ReferenceWBPaper00004630
WBPaper00038491
WBPaper00040135
WBPaper00055090
WBPaper00064787
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene