WormBase Tree Display for Gene: WBGene00001787

WBGene00001787 Evidence: Person_evidence: WBPerson1846
  SMap: S_parent: Sequence: Y53F4B
  Identity: Version: 1
    Name: CGC_name: gst-39
      Sequence_name: Y53F4B.33
      Molecular_name: Y53F4B.33
        Y53F4B.33.1
        CE22420
      Other_name: CELE_Y53F4B.33 Accession_evidence: NDB BX284602
      Public_name: gst-39
    DB_info: Database: AceView gene 2P458
        WormQTL gene WBGene00001787
        WormFlux gene WBGene00001787
        NDB locus_tag CELE_Y53F4B.33
        Panther gene CAEEL|WormBase=WBGene00001787|UniProtKB=Q9NAB0
          family PTHR11571
        NCBI gene 190226
        RefSeq protein NM_064718.5
        TREEFAM TREEFAM_ID TF353041
        TrEMBL UniProtAcc Q9NAB0
        UniProt_GCRP UniProtAcc Q9NAB0
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gst
    Allele (12)
    RNASeq_FPKM (74)
    GO_annotation: 00095918
      00095919
    Ortholog (46)
    Paralog (45)
    Structured_description: Automated_description: Enriched in g1; head mesodermal cell; intestine; muscle cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by twenty-three chemicals including glutathione; methylmercuric chloride; and rotenone based on proteomic; microarray; and RNA-seq studies. Human HPGDS enables metal ion binding activity; prostaglandin-D synthase activity; and protein homodimerization activity. Is predicted to encode a protein with the following domains: Glutathione S-transferase, N-terminal; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain superfamily; Glutathione S-transferase, C-terminal; and Thioredoxin-like superfamily. Is an ortholog of human HPGDS (hematopoietic prostaglandin D synthase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y53F4B.33
    Corresponding_transcript: Y53F4B.33.1
    Other_sequence (27)
    Associated_feature: WBsf716535
      WBsf990918
      WBsf1013959
      WBsf224322
  Experimental_info: RNAi_result: WBRNAi00057289 Inferred_automatically: RNAi_primary
      WBRNAi00020946 Inferred_automatically: RNAi_primary
      WBRNAi00115485 Inferred_automatically: RNAi_primary
      WBRNAi00115548 Inferred_automatically: RNAi_primary
      WBRNAi00037427 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027417
      Expr1160726
      Expr2012322
      Expr2030558
    Drives_construct: WBCnstr00036685
    Construct_product: WBCnstr00036685
    Microarray_results (17)
    Expression_cluster (222)
    Interaction (23)
  Map_info: Map: II Position: 24.3474 Error: 0.007795
    Positive: Positive_clone: Y53F4B Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031973
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene