WormBase Tree Display for Gene: WBGene00001744
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| WBGene00001744 | SMap | S_parent | Sequence | T10F2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gars-1 | Person_evidence | WBPerson36 | |||||
| WBPerson10953 | |||||||||
| Sequence_name | T10F2.1 | ||||||||
| Molecular_name | T10F2.1a | ||||||||
| T10F2.1a.1 | |||||||||
| CE29472 | |||||||||
| T10F2.1b | |||||||||
| CE32719 | |||||||||
| T10F2.1b.1 | |||||||||
| Other_name | grs-1 | ||||||||
| CELE_T10F2.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | gars-1 | ||||||||
| DB_info | Database (14) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 29 Jan 2010 14:16:16 | WBPerson2970 | Name_change | CGC_name | gars-1 | ||||
| Other_name | grs-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gars | ||||||||
| Allele (35) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (29) | |||||||||
| Contained_in_operon | CEOP3260 | ||||||||
| Ortholog (47) | |||||||||
| Structured_description | Concise_description | grs-1 encodes a member of the glycyl-tRNA synthetase family that affects embryonic viability and spindle maintenance during anaphase. | Paper_evidence | WBPaper00004403 | |||||
| WBPaper00004651 | |||||||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable glycine-tRNA ligase activity and protein dimerization activity. Predicted to be involved in diadenosine tetraphosphate biosynthetic process and mitochondrial glycyl-tRNA aminoacylation. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2D and distal hereditary motor neuronopathy type 5A. Is an ortholog of human GARS1 (glycyl-tRNA synthetase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111204 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4162) | ||||
| DOID:0110164 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4162) | ||||||
| Molecular_info | Corresponding_CDS | T10F2.1a | |||||||
| T10F2.1b | |||||||||
| Corresponding_transcript | T10F2.1a.1 | ||||||||
| T10F2.1b.1 | |||||||||
| Other_sequence (114) | |||||||||
| Associated_feature | WBsf666457 | ||||||||
| WBsf666892 | |||||||||
| WBsf666893 | |||||||||
| WBsf666894 | |||||||||
| WBsf666895 | |||||||||
| WBsf981468 | |||||||||
| WBsf992318 | |||||||||
| WBsf226642 | |||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Expr1013407 | ||||||||
| Expr1031037 | |||||||||
| Expr1156667 | |||||||||
| Expr2011947 | |||||||||
| Expr2030184 | |||||||||
| Drives_construct | WBCnstr00037966 | ||||||||
| Construct_product | WBCnstr00037966 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction (200) | |||||||||
| Map_info | Map | III | Position | -2.04715 | Error | 0.00165 | |||
| Positive | Positive_clone | T10F2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033090 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | dl1 : probably cytoplasmic | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
