WormBase Tree Display for Gene: WBGene00001538
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| WBGene00001538 | SMap | S_parent | Sequence | F08B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gcy-12 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F08B1.2 | ||||||||
| Molecular_name | F08B1.2a | ||||||||
| F08B1.2a.1 | |||||||||
| CE01900 | |||||||||
| F08B1.2b | |||||||||
| Other_name | CELE_F08B1.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | gcy-12 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 08 Oct 2012 11:22:29 | WBPerson1849 | Event | Acquires_merge | WBGene00017234 | ||||
| Acquires_merge | WBGene00017234 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcy | ||||||||
| Allele (95) | |||||||||
| Legacy_information | [Yu S] gcy for Guanylyl CYclase. No mutations known. GCY-12 expressed in COS-M6 cells has guanylyl cyclase activity. gcy-12::GFP expressed in PHA neurons. Predicted gene F08B1.2 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (38) | |||||||||
| Ortholog (48) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Concise_description | gcy-12 encodes a membrane guanylyl cyclase; a gcy-12::GFP reporter is expressed in the PHA neurons as well as in a number of head sensory neurons including AFD, AWC, and ASE; when expressed in COS-M6 cells, GCY-12 exhibits temperature-dependent guanylyl cyclase activity. | Paper_evidence | WBPaper00002839 | |||||
| WBPaper00027040 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 04 Apr 2008 00:00:00 | ||||||||
| Automated_description | Enables guanylate cyclase activity. Involved in negative regulation of dauer larval development; regulation of growth; and regulation of locomotion involved in locomotory behavior. Located in dendrite; non-motile cilium; and perikaryon. Expressed in excretory gland cell; ganglia; head muscle; and head neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F08B1.2a | |||||||
| Corresponding_CDS_history | F08B1.2:wp234 | ||||||||
| Corresponding_transcript | F08B1.2b | ||||||||
| F08B1.2a.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043959 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014363 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043960 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001495 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012862 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr235 | ||||||||
| Expr12481 | |||||||||
| Expr12482 | |||||||||
| Expr1022746 | |||||||||
| Expr1024430 | |||||||||
| Expr1030922 | |||||||||
| Expr1147933 | |||||||||
| Expr1147934 | |||||||||
| Expr2011977 | |||||||||
| Expr2030214 | |||||||||
| Drives_construct | WBCnstr00007995 | ||||||||
| WBCnstr00010785 | |||||||||
| WBCnstr00015848 | |||||||||
| WBCnstr00021193 | |||||||||
| WBCnstr00027465 | |||||||||
| Construct_product | WBCnstr00007995 | ||||||||
| WBCnstr00008003 | |||||||||
| WBCnstr00008004 | |||||||||
| WBCnstr00021193 | |||||||||
| WBCnstr00021194 | |||||||||
| WBCnstr00021195 | |||||||||
| WBCnstr00027465 | |||||||||
| Microarray_results | SMD_F08B1.2 | ||||||||
| 174169_at | |||||||||
| 191995_at | |||||||||
| A_12_P114281 | |||||||||
| A_12_P120276 | |||||||||
| Aff_F08B1.2 | |||||||||
| GPL13394_WBGene00001538 | |||||||||
| GPL13394_WBGene00017234 | |||||||||
| GPL13914_F08B1.2 | |||||||||
| GPL13914_F08B1.3 | |||||||||
| GPL14144_F08B1.2_3291-3350_0.921_8_C | |||||||||
| GPL14144_F08B1.2_3520-3579_0.944_4_B | |||||||||
| GPL14144_F08B1.2_3621-3680_0.961_1_A | |||||||||
| GPL14144_F08B1.3_1156-1215_0.953_3_C | |||||||||
| GPL14144_F08B1.3_1159-1218_0.955_2_B | |||||||||
| GPL14144_F08B1.3_1300-1359_0.960_1_A | |||||||||
| GPL19516_CGZ0011175 | |||||||||
| GPL19516_CGZ0014785 | |||||||||
| GPL21109_Cat_F08B1.2 | |||||||||
| GPL21109_F08B1.2 | |||||||||
| GPL3518_CE27920 | |||||||||
| GPL3518_CE27921 | |||||||||
| GPL8304_CE_WBGene00001538_A | |||||||||
| GPL8304_CE_WBGene00001538_B | |||||||||
| GPL8304_CE_WBGene00017234_A | |||||||||
| GPL8304_CE_WBGene00017234_B | |||||||||
| GPL8673_F08B1_2P02422 | |||||||||
| GPL8673_F08B1_2P02642 | |||||||||
| GPL8673_F08B1_2P03346 | |||||||||
| GPL8673_F08B1_3P00237 | |||||||||
| GPL8673_F08B1_3P00742 | |||||||||
| GPL8673_F08B1_3P01245 | |||||||||
| GPL9450_F08B1.2 | |||||||||
| GPL9450_F08B1.3 | |||||||||
| cea2.i.10703 | |||||||||
| cea2.p.35574 | |||||||||
| Expression_cluster (146) | |||||||||
| Interaction | WBInteraction000306718 | ||||||||
| WBInteraction000315868 | |||||||||
| WBInteraction000379965 | |||||||||
| WBInteraction000464484 | |||||||||
| WBInteraction000504698 | |||||||||
| WBInteraction000585503 | |||||||||
| Map_info | Map | II | Position | -1.79344 | Error | 0.001821 | |||
| Positive | Positive_clone | F08B1 | Person_evidence | WBPerson4049 | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 4338 | |||||||
| Pseudo_map_position | |||||||||
| Reference (18) | |||||||||
| Remark | Data extracted from Yu et al. (1997) | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
