WormBase Tree Display for Gene: WBGene00001515
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| WBGene00001515 | SMap | S_parent | Sequence | T24C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gap-1 | Person_evidence | WBPerson1160 | |||||
| Sequence_name | T24C12.2 | ||||||||
| Molecular_name | T24C12.2 | ||||||||
| T24C12.2.1 | |||||||||
| CE05002 | |||||||||
| Other_name | suv-1 | Paper_evidence | WBPaper00002916 | ||||||
| sli-5 | Paper_evidence | WBPaper00028495 | |||||||
| Person_evidence | WBPerson625 | ||||||||
| CELE_T24C12.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | gap-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 05 Oct 2006 10:47:33 | WBPerson2970 | Name_change | Other_name | sli-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gap | ||||||||
| Allele (46) | |||||||||
| Legacy_information | [C.elegansII] n1329 : suppresses vulvaless phenotype of lin-10(n1390); complex suppressive or enhancing interactions with other vulva determination genes; no phenotype alone. OA11. [MT] | ||||||||
| Strain | WBStrain00030706 | ||||||||
| WBStrain00030712 | |||||||||
| WBStrain00000139 | |||||||||
| WBStrain00000145 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00001516 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | gap-1 encodes a member of the Ras GTPase-activating protein family; negatively regulates the let-60 pathway with respect to vulval development. | Paper_evidence | WBPaper00001366 | |||||
| WBPaper00002916 | |||||||||
| WBPaper00003429 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable GTPase activator activity. Involved in chemosensory behavior; learning or memory; and negative regulation of Ras protein signal transduction. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Noonan syndrome. Is an ortholog of human RASA3 (RAS p21 protein activator 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3490 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9872) | ||||
| Molecular_info | Corresponding_CDS | T24C12.2 | |||||||
| Corresponding_transcript | T24C12.2.1 | ||||||||
| Other_sequence | CSC01349_1 | ||||||||
| GO250797.1 | |||||||||
| FD516661.1 | |||||||||
| Dviv_isotig15222 | |||||||||
| DAC01481_1 | |||||||||
| DA00174 | |||||||||
| CBC10547_1 | |||||||||
| Associated_feature | WBsf647845 | ||||||||
| WBsf718517 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054029 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1025718 | ||||||||
| Expr1030911 | |||||||||
| Expr1157569 | |||||||||
| Expr2011941 | |||||||||
| Expr2030178 | |||||||||
| Drives_construct | WBCnstr00036895 | ||||||||
| Construct_product | WBCnstr00036895 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (95) | |||||||||
| WBProcess | WBbiopr:00000071 | ||||||||
| Map_info | Map | X | Position | -16.8866 | Error | 0.078365 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | T24C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 1772 | |||||||
| 1773 | |||||||||
| 1777 | |||||||||
| 1778 | |||||||||
| 1779 | |||||||||
| 1780 | |||||||||
| Reference (60) | |||||||||
| Method | Gene |
