WormBase Tree Display for Gene: WBGene00001496
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WBGene00001496 | SMap | S_parent | Sequence | F25H9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | frm-10 | Person_evidence | WBPerson204 | |||||
Sequence_name | F25H9.5 | ||||||||
Molecular_name | F25H9.5a | ||||||||
F25H9.5a.1 | |||||||||
CE09662 | |||||||||
F25H9.5b | |||||||||
CE45332 | |||||||||
F25H9.5b.1 | |||||||||
Other_name | CELE_F25H9.5 | Accession_evidence | NDB | BX284605 | |||||
Public_name | frm-10 | ||||||||
DB_info | Database | AceView | gene | 5N947 | |||||
WormQTL | gene | WBGene00001496 | |||||||
WormFlux | gene | WBGene00001496 | |||||||
NDB | locus_tag | CELE_F25H9.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001496|UniProtKB=O02254 | |||||||
family | PTHR13283 | ||||||||
NCBI | gene | 179828 | |||||||
RefSeq | protein | NM_001269579.3 | |||||||
NM_001269578.4 | |||||||||
TREEFAM | TREEFAM_ID | TF317921 | |||||||
TrEMBL | UniProtAcc | O02254 | |||||||
E1B6U6 | |||||||||
UniProt_GCRP | UniProtAcc | O02254 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | frm | ||||||||
Allele (59) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00008084 | ||||||||
00008085 | |||||||||
Ortholog (28) | |||||||||
Paralog | WBGene00013955 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | frm-10 encodes a protein that contains an N-terminal FERM (Band 4.1-ezrin-radixin-moesin) domain; by homology, FRM-10 is predicted to function as a membrane-cytoskeleton linker protein that plays a role in cell adhesion, migration, or organization of cell surface structures; however, as loss of frm-10 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of FRM-10 in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00004651 | |||||
WBPaper00005654 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to be involved in negative regulation of canonical Wnt signaling pathway. Predicted to be located in plasma membrane. Is an ortholog of human FRMD8 (FERM domain containing 8). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS (2) | ||||||||
Corresponding_transcript | F25H9.5a.1 | ||||||||
F25H9.5b.1 | |||||||||
Other_sequence | CBC03750_1 | ||||||||
CR02018 | |||||||||
CJC01301_1 | |||||||||
CR09148 | |||||||||
CJC16111_1 | |||||||||
CRC01510_1 | |||||||||
Hbac_isotig05989 | |||||||||
CR11055 | |||||||||
Associated_feature | WBsf647460 | ||||||||
WBsf662027 | |||||||||
WBsf1001824 | |||||||||
WBsf232781 | |||||||||
WBsf232782 | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr1020045 | ||||||||
Expr1030897 | |||||||||
Expr1149479 | |||||||||
Expr2011882 | |||||||||
Expr2030120 | |||||||||
Drives_construct | WBCnstr00036910 | ||||||||
Construct_product | WBCnstr00036910 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (132) | |||||||||
Interaction (53) | |||||||||
Map_info | Map | V | Position | 5.34882 | Error | 0.000691 | |||
Positive | Positive_clone | F25H9 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024261 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | data submitted by [Gobel V] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |