WormBase Tree Display for Gene: WBGene00001496

WBGene00001496 SMap: S_parent: Sequence: F25H9
  Identity: Version: 1
    Name: CGC_name: frm-10 Person_evidence: WBPerson204
      Sequence_name: F25H9.5
      Molecular_name: F25H9.5a
        F25H9.5a.1
        CE09662
        F25H9.5b
        CE45332
        F25H9.5b.1
      Other_name: CELE_F25H9.5 Accession_evidence: NDB BX284605
      Public_name: frm-10
    DB_info: Database: AceView gene 5N947
        WormQTL gene WBGene00001496
        WormFlux gene WBGene00001496
        NDB locus_tag CELE_F25H9.5
        Panther gene CAEEL|WormBase=WBGene00001496|UniProtKB=O02254
          family PTHR13283
        NCBI gene 179828
        RefSeq protein NM_001269579.3
            NM_001269578.4
        TREEFAM TREEFAM_ID TF317921
        TrEMBL UniProtAcc O02254
            E1B6U6
        UniProt_GCRP UniProtAcc O02254
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: frm
    Allele (59)
    RNASeq_FPKM (74)
    GO_annotation: 00008084
      00008085
    Ortholog: WBGene00052802 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028938 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00163697 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00124774 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00219507 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g1200 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g4997 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3084 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19103 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17533 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8253 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20943 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5156 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7752 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-frm-10 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold282.g726 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01175.g19013 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03820 Caenorhabditis latens From_analysis: WormBase-Compara
      Sp34_50159200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16250 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00296486 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301506 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0039282 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-090812-5 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      HGNC:25462 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:24690 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1914707 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1310323 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00013955 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: frm-10 encodes a protein that contains an N-terminal FERM (Band 4.1-ezrin-radixin-moesin) domain; by homology, FRM-10 is predicted to function as a membrane-cytoskeleton linker protein that plays a role in cell adhesion, migration, or organization of cell surface structures; however, as loss of frm-10 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of FRM-10 in C. elegans development and/or behavior is not yet known. Paper_evidence: WBPaper00004651
            WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be involved in negative regulation of canonical Wnt signaling pathway. Predicted to be located in plasma membrane. Is an ortholog of human FRMD8 (FERM domain containing 8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F25H9.5a
      F25H9.5b
    Corresponding_transcript: F25H9.5a.1
      F25H9.5b.1
    Other_sequence: CBC03750_1
      CR02018
      CJC01301_1
      CR09148
      CJC16111_1
      CRC01510_1
      Hbac_isotig05989
      CR11055
    Associated_feature: WBsf647460
      WBsf662027
      WBsf1001824
      WBsf232781
      WBsf232782
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1020045
      Expr1030897
      Expr1149479
      Expr2011882
      Expr2030120
    Drives_construct: WBCnstr00036910
    Construct_product: WBCnstr00036910
    Microarray_results (22)
    Expression_cluster (132)
    Interaction (53)
  Map_info: Map: V Position: 5.34882 Error: 0.000691
    Positive: Positive_clone: F25H9 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024261
    WBPaper00038491
    WBPaper00055090
  Remark: data submitted by [Gobel V]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene