WormBase Tree Display for Gene: WBGene00001496
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| WBGene00001496 | SMap | S_parent | Sequence | F25H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | frm-10 | Person_evidence | WBPerson204 | |||||
| Sequence_name | F25H9.5 | ||||||||
| Molecular_name | F25H9.5a | ||||||||
| F25H9.5a.1 | |||||||||
| CE09662 | |||||||||
| F25H9.5b | |||||||||
| CE45332 | |||||||||
| F25H9.5b.1 | |||||||||
| Other_name | CELE_F25H9.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | frm-10 | ||||||||
| DB_info | Database | AceView | gene | 5N947 | |||||
| WormQTL | gene | WBGene00001496 | |||||||
| WormFlux | gene | WBGene00001496 | |||||||
| NDB | locus_tag | CELE_F25H9.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001496|UniProtKB=O02254 | |||||||
| family | PTHR13283 | ||||||||
| NCBI | gene | 179828 | |||||||
| RefSeq | protein | NM_001269579.3 | |||||||
| NM_001269578.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF317921 | |||||||
| TrEMBL | UniProtAcc | O02254 | |||||||
| E1B6U6 | |||||||||
| UniProt_GCRP | UniProtAcc | O02254 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | frm | ||||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00008084 | ||||||||
| 00008085 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00013955 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | frm-10 encodes a protein that contains an N-terminal FERM (Band 4.1-ezrin-radixin-moesin) domain; by homology, FRM-10 is predicted to function as a membrane-cytoskeleton linker protein that plays a role in cell adhesion, migration, or organization of cell surface structures; however, as loss of frm-10 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of FRM-10 in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in negative regulation of canonical Wnt signaling pathway. Predicted to be located in plasma membrane. Is an ortholog of human FRMD8 (FERM domain containing 8). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25H9.5a | |||||||
| F25H9.5b | |||||||||
| Corresponding_transcript | F25H9.5a.1 | ||||||||
| F25H9.5b.1 | |||||||||
| Other_sequence | CBC03750_1 | ||||||||
| CR02018 | |||||||||
| CJC01301_1 | |||||||||
| CR09148 | |||||||||
| CJC16111_1 | |||||||||
| CRC01510_1 | |||||||||
| Hbac_isotig05989 | |||||||||
| CR11055 | |||||||||
| Associated_feature | WBsf647460 | ||||||||
| WBsf662027 | |||||||||
| WBsf1001824 | |||||||||
| WBsf232781 | |||||||||
| WBsf232782 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1020045 | ||||||||
| Expr1030897 | |||||||||
| Expr1149479 | |||||||||
| Expr2011882 | |||||||||
| Expr2030120 | |||||||||
| Drives_construct | WBCnstr00036910 | ||||||||
| Construct_product | WBCnstr00036910 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction | WBInteraction000113516 | ||||||||
| WBInteraction000150540 | |||||||||
| WBInteraction000151296 | |||||||||
| WBInteraction000164719 | |||||||||
| WBInteraction000165288 | |||||||||
| WBInteraction000198921 | |||||||||
| WBInteraction000213063 | |||||||||
| WBInteraction000214505 | |||||||||
| WBInteraction000221169 | |||||||||
| WBInteraction000221876 | |||||||||
| WBInteraction000232758 | |||||||||
| WBInteraction000237280 | |||||||||
| WBInteraction000246006 | |||||||||
| WBInteraction000246367 | |||||||||
| WBInteraction000251541 | |||||||||
| WBInteraction000252397 | |||||||||
| WBInteraction000256378 | |||||||||
| WBInteraction000259618 | |||||||||
| WBInteraction000259696 | |||||||||
| WBInteraction000260695 | |||||||||
| WBInteraction000266498 | |||||||||
| WBInteraction000274018 | |||||||||
| WBInteraction000274080 | |||||||||
| WBInteraction000274930 | |||||||||
| WBInteraction000277756 | |||||||||
| WBInteraction000279729 | |||||||||
| WBInteraction000282608 | |||||||||
| WBInteraction000287713 | |||||||||
| WBInteraction000292366 | |||||||||
| WBInteraction000297585 | |||||||||
| WBInteraction000302488 | |||||||||
| WBInteraction000326541 | |||||||||
| WBInteraction000351209 | |||||||||
| WBInteraction000362208 | |||||||||
| WBInteraction000367506 | |||||||||
| WBInteraction000373760 | |||||||||
| WBInteraction000373853 | |||||||||
| WBInteraction000375236 | |||||||||
| WBInteraction000379061 | |||||||||
| WBInteraction000379307 | |||||||||
| WBInteraction000389903 | |||||||||
| WBInteraction000390893 | |||||||||
| WBInteraction000398637 | |||||||||
| WBInteraction000404024 | |||||||||
| WBInteraction000405898 | |||||||||
| WBInteraction000410954 | |||||||||
| WBInteraction000420348 | |||||||||
| WBInteraction000425937 | |||||||||
| WBInteraction000444843 | |||||||||
| WBInteraction000452854 | |||||||||
| WBInteraction000455641 | |||||||||
| WBInteraction000459637 | |||||||||
| WBInteraction000560364 | |||||||||
| Map_info | Map | V | Position | 5.34882 | Error | 0.000691 | |||
| Positive | Positive_clone | F25H9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024261 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | data submitted by [Gobel V] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
