WormBase Tree Display for Gene: WBGene00001483
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| WBGene00001483 | SMap | S_parent | Sequence | C03C11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | fog-3 | Person_evidence | WBPerson261 | |||||
| Sequence_name | C03C11.2 | ||||||||
| Molecular_name | C03C11.2 | ||||||||
| C03C11.2.1 | |||||||||
| CE07874 | |||||||||
| Other_name | CELE_C03C11.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | fog-3 | ||||||||
| DB_info | Database | AceView | gene | 1K593 | |||||
| WormQTL | gene | WBGene00001483 | |||||||
| WormFlux | gene | WBGene00001483 | |||||||
| NDB | locus_tag | CELE_C03C11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001483|UniProtKB=G5EDX7 | |||||||
| family | PTHR17537 | ||||||||
| NCBI | gene | 172863 | |||||||
| RefSeq | protein | NM_060245.6 | |||||||
| TrEMBL | UniProtAcc | G5EDX7 | |||||||
| UniProt_GCRP | UniProtAcc | G5EDX7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fog | ||||||||
| Allele (37) | |||||||||
| Legacy_information | [C.elegansII] q469 : XX animals transformed into females, XO animals somatically male, make oocytes in germ line. q469/Df similar. No dominant phenotypes. ES3 (adult XX), ME0.OA>10: q441, q443, q470, q520fdi, q502uvp,oz137, oz147. [Ellis and Kimble 1995; RE] | ||||||||
| Strain | WBStrain00022550 | ||||||||
| WBStrain00022589 | |||||||||
| WBStrain00022656 | |||||||||
| WBStrain00022661 | |||||||||
| WBStrain00040667 | |||||||||
| WBStrain00004780 | |||||||||
| WBStrain00005668 | |||||||||
| WBStrain00005669 | |||||||||
| WBStrain00048384 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00020380 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | fog-3 encodes a protein that has similarity, in its N-terminus, to the vertebrate Tob, BTG1, and BTG2 proteins that function in growth control and/or differentiation; in C. elegans, FOG-3 activity is required in the germ line throughout development for initiation and maintenance of spermatogenesis; fog-3 mRNA is expressed at highest levels in the L3, L4, and young adult stages of development, when spermatogenesis occurs; fog-3 transcription appears to be under the control of TRA-1A, which interacts with predicted TRA-1A binding sites in the fog-3 promoter in vitro. | Paper_evidence | WBPaper00003882 | |||||
| WBPaper00004256 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 27 Oct 2005 00:00:00 | ||||||||
| Automated_description | Predicted to enable transcription corepressor activity. Involved in cell fate specification; developmental process involved in reproduction; and positive regulation of oocyte development. Located in cytoplasm and nuclear periphery. Expressed in germ line. Is an ortholog of human TOB1 (transducer of ERBB2, 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C03C11.2 | |||||||
| Corresponding_transcript | C03C11.2.1 | ||||||||
| Other_sequence | AY589605.1 | ||||||||
| Associated_feature | WBsf979085 | ||||||||
| WBsf984884 | |||||||||
| WBsf218378 | |||||||||
| WBsf218379 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1244 | ||||||||
| Expr9348 | |||||||||
| Expr12584 | |||||||||
| Expr1027248 | |||||||||
| Expr1030885 | |||||||||
| Expr1143617 | |||||||||
| Expr2011867 | |||||||||
| Expr2030105 | |||||||||
| Drives_construct (15) | |||||||||
| Construct_product (16) | |||||||||
| Regulate_expr_cluster | WBPaper00048762:FOG-3_associated | ||||||||
| WBPaper00054792:FOG-3_interacting | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (173) | |||||||||
| Interaction (64) | |||||||||
| Anatomy_function | WBbtf0506 | ||||||||
| Map_info | Map | I | Position | 4.49216 | Error | 0.029361 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | C03C11 | Person_evidence | WBPerson159 | |||||
| Author_evidence | Chen P-J | ||||||||
| Singal A | |||||||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point (22) | ||||||||
| Pos_neg_data (23) | |||||||||
| Reference (105) | |||||||||
| Picture | WBPicture0000013095 | ||||||||
| Method | Gene |
