WormBase Tree Display for Gene: WBGene00001446
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| WBGene00001446 | SMap | S_parent | Sequence | W07E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | flp-3 | Person_evidence | WBPerson369 | |||||
| Sequence_name | W07E11.2 | ||||||||
| Molecular_name | W07E11.2 | ||||||||
| W07E11.2.1 | |||||||||
| CE02373 | |||||||||
| Other_name | CELE_W07E11.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | flp-3 | ||||||||
| DB_info | Database | AceView | gene | XK710 | |||||
| WormQTL | gene | WBGene00001446 | |||||||
| WormFlux | gene | WBGene00001446 | |||||||
| NDB | locus_tag | CELE_W07E11.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001446|UniProtKB=Q23212 | |||||||
| family | PTHR20986 | ||||||||
| NCBI | gene | 181221 | |||||||
| RefSeq | protein | NM_077293.8 | |||||||
| SwissProt | UniProtAcc | Q23212 | |||||||
| TREEFAM | TREEFAM_ID | TF316891 | |||||||
| UniProt_GCRP | UniProtAcc | Q23212 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flp | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00037364 | ||||||||
| WBStrain00055068 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00077619 | ||||||||
| 00077620 | |||||||||
| 00077621 | |||||||||
| 00077622 | |||||||||
| 00077623 | |||||||||
| 00077624 | |||||||||
| 00077625 | |||||||||
| 00108729 | |||||||||
| Ortholog | WBGene00063133 | Caenorhabditis remanei | From_analysis | OMA | |||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00025134 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WBGene00125283 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| chrX_pilon.g19847 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00001444 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00001457 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001461 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | flp-3 encodes nine copies of a GTMRFamide-containing peptide that is predicted to function as a neuropeptide that inhibits pharyngeal action potential in a manner similar to octopamine without having a significant effect on basal resting membrane potential; flp-3 is expressed in three pairs of neurons IL1D, OLL, URB. | Paper_evidence | WBPaper00003889 | |||||
| WBPaper00004931 | |||||||||
| WBPaper00030992 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 09 Aug 2012 00:00:00 | ||||||||
| Automated_description | Involved in negative regulation of action potential; neuropeptide signaling pathway; and regulation of pharyngeal pumping. Predicted to be located in extracellular region. Expressed in head; motor neurons; sensory neurons; somatic nervous system; and in male. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W07E11.2 | |||||||
| Corresponding_transcript | W07E11.2.1 | ||||||||
| Other_sequence | AF042389 | ||||||||
| PSC03751_1 | |||||||||
| CBC16500_1 | |||||||||
| CJC06883_1 | |||||||||
| HGC07030_1 | |||||||||
| HG06566 | |||||||||
| GW411138.1 | |||||||||
| JI216353.1 | |||||||||
| EF422867.1 | |||||||||
| BXC03042_1 | |||||||||
| Associated_feature | WBsf237830 | ||||||||
| WBsf237831 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054945 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019697 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054946 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027743 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (14) | |||||||||
| Drives_construct | WBCnstr00005117 | ||||||||
| WBCnstr00010910 | |||||||||
| WBCnstr00036941 | |||||||||
| WBCnstr00042539 | |||||||||
| WBCnstr00042707 | |||||||||
| Construct_product | WBCnstr00005799 | ||||||||
| WBCnstr00036941 | |||||||||
| WBCnstr00042539 | |||||||||
| Antibody | WBAntibody00000611 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction (59) | |||||||||
| Map_info | Map | X | Position | 1.73922 | Error | 0.001345 | |||
| Positive | Positive_clone | W07E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4314 | |||||||
| 4879 | |||||||||
| 5561 | |||||||||
| Reference (38) | |||||||||
| Method | Gene |
