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WormBase Tree Display for Gene: WBGene00025134

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Name Class

WBGene00025134SMapS_parentSequencecb25.fpc0045
IdentityVersion2
NameCGC_nameCbr-flp-3From_analysisInferred_from_orthology
Sequence_nameCBG01978
Molecular_nameCBG01978
CBG01978.1
CBP41458
Other_nameCBG_01978Accession_evidenceNDBHE601451
Public_nameCbr-flp-3
DB_infoDatabaseNDBlocus_tagCBG_01978
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-flp-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classflp
RNASeq_FPKMWBls:000000211.5248From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.37695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.6444From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.03144From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.24945From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
5.7042From_analysisRNASeq.briggsae.WBls:0000002.control_median
6.54566From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.182591From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.365183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.641408From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.55904From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000041.48843From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
1.72916From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.96989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.40459From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.53481From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.69258From_analysisRNASeq.briggsae.WBls:0000004.control_mean
2.06519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
WBls:0000024 (12)
WBls:00000271.02621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.35222From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
17.241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.53981From_analysisRNASeq.briggsae.WBls:0000027.control_mean
13.8521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
7.60216From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.36788From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.0481From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.8472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.0939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.16398From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.64065From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.0556From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.11732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004118.711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.63243From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
5.19954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.23845From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.27736From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
8.20508From_analysisRNASeq.briggsae.WBls:0000041.control_mean
11.9942From_analysisRNASeq.briggsae.WBls:0000041.control_median
15.9786From_analysisRNASeq.briggsae.WBls:0000041.control_mean
25.8979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
37.1536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000631.48031From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.20404From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
2.35749From_analysisRNASeq.briggsae.WBls:0000063.control_mean
2.63204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.47104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.41804From_analysisRNASeq.briggsae.WBls:0000063.control_median
3.05639From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.5509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001015.16398From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.82016From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
4.3982From_analysisRNASeq.briggsae.total_over_all_stages.control_median
7.65927From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00128538
Ortholog (21)
Structured_descriptionAutomated_descriptionPredicted to be involved in neuropeptide signaling pathway. Is an ortholog of C. elegans flp-3. In C. elegans, flp-3 is involved in negative regulation of action potential; neuropeptide signaling pathway; and regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01978
Corresponding_CDS_historyCBG01978:bp255
Corresponding_transcriptCBG01978.1
Other_sequencePSC03751_1
CBC16500_1
CJC06883_1
HGC07030_1
HG06566
GW411138.1
JI216353.1
EF422867.1
BXC03042_1
Experimental_infoExpr_patternExpr1052162
Microarray_resultsGPL8303_CB6_WBGene00025134_A
GPL8303_CB6_WBGene00025134_B
GPL14143_CBG01978_316-375_0.769_2_B
GPL14143_CBG01978_321-380_0.738_3_C
GPL14143_CBG01978_498-557_0.892_1_A
MethodGene