WormBase Tree Display for Gene: WBGene00001399

WBGene00001399 SMap: S_parent: Sequence: F10D2
  Identity: Version: 1
    Name: CGC_name: fat-7
      Sequence_name: F10D2.9
      Molecular_name: F10D2.9
        F10D2.9.1
        CE09320
      Other_name: CELE_F10D2.9 Accession_evidence: NDB BX284605
      Public_name: fat-7
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fat
    Allele (42)
    Strain: WBStrain00004020
      WBStrain00004021
      WBStrain00004022
      WBStrain00008410
      WBStrain00008411
    RNASeq_FPKM (74)
    GO_annotation (21)
    Ortholog (59)
    Paralog: WBGene00001397 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001398 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Concise_description: fat-7 encodes an essential delta-9 fatty acid desaturase that is required for the synthesis of monounsaturated fatty acids; fat-7 can substitute for the functions of the other two fatty acid desaturases, fat-5 and fat-6; RNA interference has shown that fat-7 is required for viability and normal growth. Paper_evidence: WBPaper00004149
            WBPaper00004424
            WBPaper00005754
            WBPaper00006113
            WBPaper00013538
            WBPaper00013550
          Curator_confirmed: WBPerson324
            WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables stearoyl-CoA 9-desaturase activity. Involved in fatty acid biosynthetic process and post-embryonic development. Acts upstream of or within intracellular oxygen homeostasis and response to hypoxia. Predicted to be located in endoplasmic reticulum membrane. Expressed in intestinal cell. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 79. Is an ortholog of human SCD (stearoyl-CoA desaturase) and SCD5 (stearoyl-CoA desaturase 5). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0112160 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:21088)
  Molecular_info: Corresponding_CDS: F10D2.9
    Corresponding_transcript: F10D2.9.1
    Other_sequence (60)
    Associated_feature: WBsf019173
      WBsf019174
      WBsf019175
      WBsf978978
      WBsf233910
      WBsf233911
  Experimental_info: RNAi_result (54)
    Expr_pattern: Chronogram631
      Expr4292
      Expr4571
      Expr5716
      Expr13449
      Expr16083
      Expr1021466
      Expr1148206
      Expr2011440
      Expr2029678
    Drives_construct: WBCnstr00004076
      WBCnstr00009389
      WBCnstr00011890
      WBCnstr00016671
      WBCnstr00020551
      WBCnstr00036971
      WBCnstr00042754
    Construct_product: WBCnstr00011890
      WBCnstr00016671
      WBCnstr00020551
      WBCnstr00036971
      WBCnstr00038737
    Microarray_results (18)
    Expression_cluster (383)
    Interaction: WBInteraction000005658
      WBInteraction000005659
      WBInteraction000005660
      WBInteraction000005773
      WBInteraction000005774
      WBInteraction000005775
      WBInteraction000008980
      WBInteraction000008987
      WBInteraction000009000
      WBInteraction000009002
      WBInteraction000009020
      WBInteraction000009021
      WBInteraction000009022
      WBInteraction000009024
      WBInteraction000009027
      WBInteraction000041683
      WBInteraction000041853
      WBInteraction000046888
      WBInteraction000050461
      WBInteraction000050462
      WBInteraction000050705
      WBInteraction000052708
      WBInteraction000052926
      WBInteraction000101430
      WBInteraction000124840
      WBInteraction000124841
      WBInteraction000133189
      WBInteraction000134003
      WBInteraction000139362
      WBInteraction000146436
      WBInteraction000157152
      WBInteraction000170879
      WBInteraction000176995
      WBInteraction000181614
      WBInteraction000184399
      WBInteraction000187816
      WBInteraction000188182
      WBInteraction000190249
      WBInteraction000192887
      WBInteraction000194176
      WBInteraction000194667
      WBInteraction000195599
      WBInteraction000196850
      WBInteraction000201782
      WBInteraction000202154
      WBInteraction000203276
      WBInteraction000203551
      WBInteraction000205649
      WBInteraction000207355
      WBInteraction000208192
      WBInteraction000211331
      WBInteraction000215240
      WBInteraction000215252
      WBInteraction000215998
      WBInteraction000216590
      WBInteraction000217296
      WBInteraction000219381
      WBInteraction000224039
      WBInteraction000225812
      WBInteraction000226027
      WBInteraction000227345
      WBInteraction000228266
      WBInteraction000228477
      WBInteraction000229979
      WBInteraction000232138
      WBInteraction000232702
      WBInteraction000236770
      WBInteraction000236962
      WBInteraction000238470
      WBInteraction000239169
      WBInteraction000241313
      WBInteraction000244392
      WBInteraction000244422
      WBInteraction000247934
      WBInteraction000249063
      WBInteraction000249564
      WBInteraction000252088
      WBInteraction000254758
      WBInteraction000255434
      WBInteraction000255658
      WBInteraction000258894
      WBInteraction000260220
      WBInteraction000261739
      WBInteraction000261916
      WBInteraction000262561
      WBInteraction000267580
      WBInteraction000269297
      WBInteraction000269611
      WBInteraction000270325
      WBInteraction000271851
      WBInteraction000272134
      WBInteraction000272240
      WBInteraction000274801
      WBInteraction000277779
      WBInteraction000278540
      WBInteraction000280766
      WBInteraction000280868
      WBInteraction000280981
      WBInteraction000281272
      WBInteraction000281453
      WBInteraction000281709
      WBInteraction000282189
      WBInteraction000282399
      WBInteraction000282506
      WBInteraction000284505
      WBInteraction000284530
      WBInteraction000285036
      WBInteraction000287092
      WBInteraction000294077
      WBInteraction000296075
      WBInteraction000297020
      WBInteraction000299239
      WBInteraction000299624
      WBInteraction000300844
      WBInteraction000300939
      WBInteraction000301234
      WBInteraction000303156
      WBInteraction000303299
      WBInteraction000304754
      WBInteraction000305066
      WBInteraction000312851
      WBInteraction000315262
      WBInteraction000315266
      WBInteraction000315300
      WBInteraction000316252
      WBInteraction000317025
      WBInteraction000318501
      WBInteraction000318749
      WBInteraction000319186
      WBInteraction000320371
      WBInteraction000322781
      WBInteraction000324407
      WBInteraction000325745
      WBInteraction000325842
      WBInteraction000329126
      WBInteraction000329774
      WBInteraction000330464
      WBInteraction000332294
      WBInteraction000333528
      WBInteraction000336526
      WBInteraction000337571
      WBInteraction000337938
      WBInteraction000338811
      WBInteraction000339493
      WBInteraction000339977
      WBInteraction000340570
      WBInteraction000341547
      WBInteraction000344529
      WBInteraction000344916
      WBInteraction000346499
      WBInteraction000346917
      WBInteraction000347159
      WBInteraction000347441
      WBInteraction000348868
      WBInteraction000349235
      WBInteraction000350687
      WBInteraction000353056
      WBInteraction000355769
      WBInteraction000358482
      WBInteraction000358828
      WBInteraction000359597
      WBInteraction000360607
      WBInteraction000360847
      WBInteraction000363736
      WBInteraction000364112
      WBInteraction000366542
      WBInteraction000366623
      WBInteraction000367174
      WBInteraction000368318
      WBInteraction000369564
      WBInteraction000369792
      WBInteraction000370121
      WBInteraction000372077
      WBInteraction000372078
      WBInteraction000372079
      WBInteraction000372080
      WBInteraction000377378
      WBInteraction000378256
      WBInteraction000379350
      WBInteraction000379351
      WBInteraction000379760
      WBInteraction000379775
      WBInteraction000380015
      WBInteraction000386447
      WBInteraction000390162
      WBInteraction000393081
      WBInteraction000396741
      WBInteraction000397747
      WBInteraction000397901
      WBInteraction000398018
      WBInteraction000400163
      WBInteraction000401108
      WBInteraction000410086
      WBInteraction000410545
      WBInteraction000413346
      WBInteraction000414646
      WBInteraction000415555
      WBInteraction000416278
      WBInteraction000416331
      WBInteraction000416840
      WBInteraction000417606
      WBInteraction000420437
      WBInteraction000423029
      WBInteraction000423774
      WBInteraction000428069
      WBInteraction000431543
      WBInteraction000431624
      WBInteraction000432646
      WBInteraction000433660
      WBInteraction000438311
      WBInteraction000442138
      WBInteraction000442705
      WBInteraction000443002
      WBInteraction000444914
      WBInteraction000446006
      WBInteraction000447324
      WBInteraction000447837
      WBInteraction000448374
      WBInteraction000450451
      WBInteraction000451178
      WBInteraction000451793
      WBInteraction000453354
      WBInteraction000456991
      WBInteraction000456998
      WBInteraction000459267
      WBInteraction000460558
      WBInteraction000463505
      WBInteraction000463805
      WBInteraction000464164
      WBInteraction000465248
      WBInteraction000466928
      WBInteraction000468985
      WBInteraction000469004
      WBInteraction000469602
      WBInteraction000469603
      WBInteraction000469989
      WBInteraction000471166
      WBInteraction000471463
      WBInteraction000471464
      WBInteraction000471606
      WBInteraction000471688
      WBInteraction000472483
      WBInteraction000472521
      WBInteraction000472728
      WBInteraction000473411
      WBInteraction000473655
      WBInteraction000475030
      WBInteraction000475031
      WBInteraction000501316
      WBInteraction000501317
      WBInteraction000502086
      WBInteraction000502414
      WBInteraction000502844
      WBInteraction000502845
      WBInteraction000504209
      WBInteraction000504439
      WBInteraction000504440
      WBInteraction000504923
      WBInteraction000504931
      WBInteraction000505199
      WBInteraction000517803
      WBInteraction000517804
      WBInteraction000517805
      WBInteraction000517896
      WBInteraction000517947
      WBInteraction000517948
      WBInteraction000517949
      WBInteraction000517955
      WBInteraction000517963
      WBInteraction000520694
      WBInteraction000524999
      WBInteraction000525147
      WBInteraction000525316
      WBInteraction000525419
      WBInteraction000525420
      WBInteraction000535444
      WBInteraction000536102
      WBInteraction000540610
      WBInteraction000540611
      WBInteraction000549515
      WBInteraction000549516
      WBInteraction000549518
      WBInteraction000549522
      WBInteraction000549523
      WBInteraction000556300
      WBInteraction000556301
      WBInteraction000558851
      WBInteraction000558852
      WBInteraction000579997
    WBProcess: WBbiopr:00000121
  Map_info: Map: V Position: 0.613044 Error: 0.000716
    Positive: Positive_clone: F10D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4303
        4307
    Pseudo_map_position
  Reference (130)
  Picture: WBPicture0000013088
    WBPicture0000013096
    WBPicture0000013098
  Remark: sequence connection from [Watts J]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene