WormBase Tree Display for Gene: WBGene00001324
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WBGene00001324 | SMap | S_parent | Sequence | R11E3 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | eor | ||||||
Allele (100) | |||||||
Strain | WBStrain00031868 | ||||||
WBStrain00035410 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (21) | |||||||
Contained_in_operon | CEOP4152 | ||||||
Ortholog (43) | |||||||
Paralog | WBGene00045068 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||
WBGene00012405 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021387 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018959 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00021374 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | eor-1 encodes an ortholog of the human BTB/zinc-finger transcription factor PLZF (OMIM:176797), which is is found as a retinoic acid receptor alpha (RARA) fusion in acute promyelocytic leukemia (APL); EOR-1 positively regulates RAS/RAF-mediated signalling during excretory system development, as well as RAS/RAF- and WNT-mediated signalling during P12 fate specification; EOR-1 may function with EOR-2 and Hox genes to control the expression of Ras- and Wnt-responsive genes. | Paper_evidence | WBPaper00005068 | |||
WBPaper00005250 | |||||||
WBPaper00005344 | |||||||
WBPaper00005412 | |||||||
WBPaper00012788 | |||||||
WBPaper00012830 | |||||||
WBPaper00012882 | |||||||
WBPaper00012897 | |||||||
WBPaper00013003 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including determination of adult lifespan; nematode male tail tip morphogenesis; and signal transduction. Located in nucleus. Expressed in several structures, including dorsal nerve cord; gonad; pharynx; and vulval precursor cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R11E3.6a | |||||
R11E3.6b | |||||||
Corresponding_transcript | R11E3.6a.1 | ||||||
R11E3.6b.1 | |||||||
Other_sequence (26) | |||||||
Associated_feature | WBsf651781 | ||||||
WBsf667915 | |||||||
WBsf667916 | |||||||
WBsf667917 | |||||||
WBsf978704 | |||||||
WBsf996396 | |||||||
WBsf1017314 | |||||||
WBsf230018 | |||||||
Gene_product_binds (11290) | |||||||
Transcription_factor | WBTranscriptionFactor000003 | ||||||
Experimental_info | RNAi_result | WBRNAi00051792 | Inferred_automatically | RNAi_primary | |||
WBRNAi00034860 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022781 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061867 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022780 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (15) | |||||||
Drives_construct (12) | |||||||
Construct_product (14) | |||||||
Antibody | WBAntibody00002078 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (102) | |||||||
Interaction (168) | |||||||
Map_info | Map | IV | Position | 1.25427 | Error | 0.010263 | |
Positive | Positive_clone | R11E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4038 | |||||
4954 | |||||||
Pos_neg_data | 10661 | ||||||
Reference (55) | |||||||
Remark | Sequence connection from [Sundaram M]. krb 14/11/01 | ||||||
Positive_clone, Description and Alleles(cs28, cs40, cs44) data extracted from [Rocheleau CE, Howard RM, Goldman AP, Volk ML, Girard LJ,Sundaram MV] [ck1 020828] | |||||||
Method | Gene |