WormBase Tree Display for Gene: WBGene00018959
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| WBGene00018959 | SMap | S_parent | Sequence | F56D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F56D1.1 | |||||||
| Molecular_name | F56D1.1 | ||||||||
| F56D1.1.1 | |||||||||
| CE52832 | |||||||||
| Other_name | F56D1.h | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F56D1.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | F56D1.1 | ||||||||
| DB_info | Database | AceView | gene | 2F769 | |||||
| WormQTL | gene | WBGene00018959 | |||||||
| WormFlux | gene | WBGene00018959 | |||||||
| NDB | locus_tag | CELE_F56D1.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018959|UniProtKB=Q10127 | |||||||
| family | PTHR24408 | ||||||||
| NCBI | gene | 186375 | |||||||
| RefSeq | protein | NM_062641.4 | |||||||
| SwissProt | UniProtAcc | Q10127 | |||||||
| UniProt_GCRP | UniProtAcc | Q10127 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00056150 | ||||||||
| 00056151 | |||||||||
| 00056152 | |||||||||
| 00056153 | |||||||||
| 00056154 | |||||||||
| 00056155 | |||||||||
| 00056156 | |||||||||
| 00056157 | |||||||||
| Contained_in_operon | CEOP2184 | ||||||||
| Ortholog (61) | |||||||||
| Paralog | WBGene00006492 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00011066 | |||||||||
| WBGene00011206 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011505 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015451 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018567 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019751 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00001324 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021374 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56D1.1 | |||||||
| Corresponding_CDS_history | F56D1.1:wp130 | ||||||||
| F56D1.1:wp268 | |||||||||
| Corresponding_transcript | F56D1.1.1 | ||||||||
| Other_sequence | Dviv_isotig17854 | ||||||||
| CRC03044_1 | |||||||||
| Hbac_isotig06605 | |||||||||
| Tcir_isotig07482 | |||||||||
| CGC00753_1 | |||||||||
| Tcol_isotig09190 | |||||||||
| CR06416 | |||||||||
| Tcol_isotig09191 | |||||||||
| CRC00529_1 | |||||||||
| Associated_feature | WBsf978597 | ||||||||
| Transcription_factor | WBTranscriptionFactor001023 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00027373 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015807 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008170 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025703 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048680 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010955 | ||||||||
| Expr1038180 | |||||||||
| Expr1152439 | |||||||||
| Expr2004290 | |||||||||
| Expr2022514 | |||||||||
| Drives_construct | WBCnstr00026164 | ||||||||
| Construct_product | WBCnstr00026164 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (79) | |||||||||
| Map_info | Positive | Positive_clone | F56D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -1.28509 | |||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00056971 | |||||||||
| Method | Gene |
