WormBase Tree Display for Gene: WBGene00001063
expand all nodes | collapse all nodes | view schema
| WBGene00001063 | SMap | S_parent | Sequence | M01E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dpy-1 | Person_evidence | WBPerson261 | |||||
| Sequence_name | M01E10.2 | ||||||||
| Molecular_name | M01E10.2a | ||||||||
| M01E10.2a.1 | |||||||||
| CE54093 | |||||||||
| M01E10.2b | |||||||||
| CE46375 | |||||||||
| M01E10.2b.1 | |||||||||
| Other_name | CELE_M01E10.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | dpy-1 | ||||||||
| DB_info | Database | AceView | gene | 3D126 | |||||
| WormQTL | gene | WBGene00001063 | |||||||
| WormFlux | gene | WBGene00001063 | |||||||
| NDB | locus_tag | CELE_M01E10.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001063|UniProtKB=G4SNP7 | |||||||
| family | PTHR22907 | ||||||||
| NCBI | gene | 175342 | |||||||
| RefSeq | protein | NM_001381759.2 | |||||||
| NM_001384037.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF315307 | |||||||
| TrEMBL | UniProtAcc | Q9TXR6 | |||||||
| G4SNP7 | |||||||||
| UniProt_GCRP | UniProtAcc | G4SNP7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 15 Dec 2006 14:47:33 | WBPerson1826 | Event | Acquires_merge | WBGene00019708 | ||||
| Acquires_merge | WBGene00019708 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpy | ||||||||
| Reference_allele | WBVar00142900 | ||||||||
| Allele (365) | |||||||||
| Legacy_information | el : strong dumpy. ES3 ME1. NA > 10 (e6 e830xri e874pdi e1177icr etc.). High forward mutation frequency. | ||||||||
| See also e992 | |||||||||
| [C.elegansII] el : strong dumpy. Mosaic analysis indicates focus in hyp7, also required in other hypodermal syncytia. Suppresses some alleles of glp-1.ES3 ME1. OA>20: e6, e830xri, e874pdi, e1177icr,f14, s513 etc. High forward mutation frequency. [Brenner 1974; Hedgecock and Herman 1995; EL] | |||||||||
| Strain (70) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00009323 | ||||||||
| 00009324 | |||||||||
| 00009325 | |||||||||
| Ortholog (26) | |||||||||
| Paralog (31) | |||||||||
| Structured_description | Concise_description | dpy-1 encodes a cuticulin; DPY-1 activity is required for normal body length and alae formation; dpy-1's site of action is localized to the hyp7 syncytium, based on mosaic analysis. | Paper_evidence | WBPaper00000031 | |||||
| WBPaper00002307 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 02 May 2014 00:00:00 | ||||||||
| Automated_description | Involved in body morphogenesis and regulation of growth. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M01E10.2a | |||||||
| M01E10.2b | |||||||||
| Corresponding_CDS_history | M01E10.2:wp227 | ||||||||
| M01E10.2a:wp275 | |||||||||
| Corresponding_transcript | M01E10.2a.1 | ||||||||
| M01E10.2b.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Expr1018007 | ||||||||
| Expr1030672 | |||||||||
| Expr1154447 | |||||||||
| Expr2011062 | |||||||||
| Expr2029299 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (178) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | III | Position | -15.6591 | Error | 0.008857 | |||
| Well_ordered | |||||||||
| Positive | Inside_rearr | mnDp37 | |||||||
| sDp3 | |||||||||
| tDf9 | |||||||||
| Positive_clone | M01E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Negative | Outside_rearr | tDf10 | |||||||
| Mapping_data | 2_point (29) | ||||||||
| Multi_point (66) | |||||||||
| Pos_neg_data (11) | |||||||||
| Landmark_gene | |||||||||
| Reference (67) | |||||||||
| Method | Gene |
