WormBase Tree Display for Gene: WBGene00001063
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WBGene00001063 | SMap | S_parent | Sequence | M01E10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | dpy-1 | Person_evidence | WBPerson261 | |||
Sequence_name | M01E10.2 | ||||||
Molecular_name | M01E10.2a | ||||||
M01E10.2a.1 | |||||||
CE54093 | |||||||
M01E10.2b | |||||||
CE46375 | |||||||
M01E10.2b.1 | |||||||
Other_name | CELE_M01E10.2 | Accession_evidence | NDB | BX284603 | |||
Public_name | dpy-1 | ||||||
DB_info | Database | AceView | gene | 3D126 | |||
WormQTL | gene | WBGene00001063 | |||||
WormFlux | gene | WBGene00001063 | |||||
NDB | locus_tag | CELE_M01E10.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00001063|UniProtKB=G4SNP7 | |||||
family | PTHR22907 | ||||||
NCBI | gene | 175342 | |||||
RefSeq | protein | NM_001381759.2 | |||||
NM_001384037.2 | |||||||
TREEFAM | TREEFAM_ID | TF315307 | |||||
TrEMBL | UniProtAcc | Q9TXR6 | |||||
G4SNP7 | |||||||
UniProt_GCRP | UniProtAcc | G4SNP7 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00019708 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dpy | ||||||
Reference_allele | WBVar00142900 | ||||||
Allele (365) | |||||||
Legacy_information | el : strong dumpy. ES3 ME1. NA > 10 (e6 e830xri e874pdi e1177icr etc.). High forward mutation frequency. | ||||||
See also e992 | |||||||
[C.elegansII] el : strong dumpy. Mosaic analysis indicates focus in hyp7, also required in other hypodermal syncytia. Suppresses some alleles of glp-1.ES3 ME1. OA>20: e6, e830xri, e874pdi, e1177icr,f14, s513 etc. High forward mutation frequency. [Brenner 1974; Hedgecock and Herman 1995; EL] | |||||||
Strain (70) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00009323 | ||||||
00009324 | |||||||
00009325 | |||||||
Ortholog (26) | |||||||
Paralog (31) | |||||||
Structured_description | Concise_description | dpy-1 encodes a cuticulin; DPY-1 activity is required for normal body length and alae formation; dpy-1's site of action is localized to the hyp7 syncytium, based on mosaic analysis. | Paper_evidence | WBPaper00000031 | |||
WBPaper00002307 | |||||||
Curator_confirmed | WBPerson48 | ||||||
WBPerson1843 | |||||||
Date_last_updated | 02 May 2014 00:00:00 | ||||||
Automated_description | Involved in body morphogenesis and regulation of growth. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | M01E10.2a | |||||
M01E10.2b | |||||||
Corresponding_CDS_history | M01E10.2:wp227 | ||||||
M01E10.2a:wp275 | |||||||
Corresponding_transcript | M01E10.2a.1 | ||||||
M01E10.2b.1 | |||||||
Other_sequence (19) | |||||||
Associated_feature (13) | |||||||
Experimental_info | RNAi_result (21) | ||||||
Expr_pattern | Expr1018007 | ||||||
Expr1030672 | |||||||
Expr1154447 | |||||||
Expr2011062 | |||||||
Expr2029299 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (178) | |||||||
Interaction (14) | |||||||
Map_info | Map | III | Position | -15.6591 | Error | 0.008857 | |
Well_ordered | |||||||
Positive | Inside_rearr | mnDp37 | |||||
sDp3 | |||||||
tDf9 | |||||||
Positive_clone | M01E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Negative | Outside_rearr | tDf10 | |||||
Mapping_data | 2_point (29) | ||||||
Multi_point (66) | |||||||
Pos_neg_data (11) | |||||||
Landmark_gene | |||||||
Reference (67) | |||||||
Method | Gene |