WormBase Tree Display for Gene: WBGene00000804
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WBGene00000804 | Evidence | Paper_evidence | WBPaper00005872 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y48E1B | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | csc-1 | Person_evidence | WBPerson203 | |||||
Sequence_name | Y48E1B.12 | ||||||||
Molecular_name | Y48E1B.12 | ||||||||
Y48E1B.12.1 | |||||||||
CE14874 | |||||||||
Other_name | CELE_Y48E1B.12 | Accession_evidence | NDB | BX284602 | |||||
Public_name | csc-1 | ||||||||
DB_info | Database | AceView | gene | 2N887 | |||||
WormQTL | gene | WBGene00000804 | |||||||
WormFlux | gene | WBGene00000804 | |||||||
NDB | locus_tag | CELE_Y48E1B.12 | |||||||
NCBI | gene | 175006 | |||||||
RefSeq | protein | NM_064455.7 | |||||||
SwissProt | UniProtAcc | O45952 | |||||||
TREEFAM | TREEFAM_ID | TF343152 | |||||||
UniProt_GCRP | UniProtAcc | O45952 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | csc | ||||||||
Allele (41) | |||||||||
Strain | WBStrain00026486 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (25) | |||||||||
Ortholog (24) | |||||||||
Structured_description | Concise_description | csc-1 encodes a novel protein conserved amongst Caenorhabditis nematodes; CSC-1 is a member of the Aurora B kinase complex (chromosome passenger complex) that, in C. elegans, also includes ICP-1, BIR-1, and AIR-2; CSC-1 localizes to meiotic and mitotic chromosomes, as well as to the spindle midzone; CSC-1 is required for localization of the AIR-2 kinase, and CSC-1, ICP-1, and BIR-1 are all interdependent for their localization. | Paper_evidence | WBPaper00005872 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 22 Feb 2013 00:00:00 | ||||||||
Automated_description | Involved in mitotic cleavage furrow ingression and nuclear division. Located in condensed nuclear chromosome; meiotic spindle midzone; and mitotic spindle midzone. Expressed in oocyte. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y48E1B.12 | |||||||
Corresponding_transcript | Y48E1B.12.1 | ||||||||
Other_sequence | CBC05927_1 | ||||||||
CJC03848_1 | |||||||||
CR10025 | |||||||||
PT01422 | |||||||||
CRC01579_1 | |||||||||
Associated_feature | WBsf644808 | ||||||||
WBsf990464 | |||||||||
WBsf222375 | |||||||||
WBsf222376 | |||||||||
WBsf222377 | |||||||||
WBsf222378 | |||||||||
Experimental_info | RNAi_result (15) | ||||||||
Expr_pattern | Expr2554 | ||||||||
Expr1019181 | |||||||||
Expr1030502 | |||||||||
Expr1160360 | |||||||||
Expr2010548 | |||||||||
Expr2028788 | |||||||||
Antibody | WBAntibody00000622 | ||||||||
WBAntibody00000623 | |||||||||
WBAntibody00002844 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (150) | |||||||||
Interaction (56) | |||||||||
Map_info | Map | II | Position | 18.4151 | Error | 0.064433 | |||
Positive | Positive_clone | Y48E1B | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4842 | |||||||
4806 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005872 | ||||||||
WBPaper00024319 | |||||||||
WBPaper00025124 | |||||||||
WBPaper00025213 | |||||||||
WBPaper00027235 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |