WormBase Tree Display for Gene: WBGene00000804
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| WBGene00000804 | Evidence | Paper_evidence | WBPaper00005872 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y48E1B | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | csc-1 | Person_evidence | WBPerson203 | |||||
| Sequence_name | Y48E1B.12 | ||||||||
| Molecular_name | Y48E1B.12 | ||||||||
| Y48E1B.12.1 | |||||||||
| CE14874 | |||||||||
| Other_name | CELE_Y48E1B.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | csc-1 | ||||||||
| DB_info | Database | AceView | gene | 2N887 | |||||
| WormQTL | gene | WBGene00000804 | |||||||
| WormFlux | gene | WBGene00000804 | |||||||
| NDB | locus_tag | CELE_Y48E1B.12 | |||||||
| NCBI | gene | 175006 | |||||||
| RefSeq | protein | NM_064455.7 | |||||||
| SwissProt | UniProtAcc | O45952 | |||||||
| TREEFAM | TREEFAM_ID | TF343152 | |||||||
| UniProt_GCRP | UniProtAcc | O45952 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | csc | ||||||||
| Allele | WBVar01826707 | ||||||||
| WBVar01499702 | |||||||||
| WBVar01498435 | |||||||||
| WBVar00555809 | |||||||||
| WBVar02120652 | |||||||||
| WBVar01539816 | |||||||||
| WBVar00312460 | |||||||||
| WBVar02121577 | |||||||||
| WBVar01705979 | |||||||||
| WBVar00249065 | |||||||||
| WBVar02121971 | |||||||||
| WBVar02124561 | |||||||||
| WBVar01936851 | |||||||||
| WBVar01395060 | |||||||||
| WBVar01250744 | |||||||||
| WBVar00383147 | |||||||||
| WBVar00383148 | |||||||||
| WBVar00383149 | |||||||||
| WBVar02018319 | |||||||||
| WBVar00231426 | |||||||||
| WBVar00231427 | |||||||||
| WBVar00383150 | |||||||||
| WBVar00383151 | |||||||||
| WBVar00231428 | |||||||||
| WBVar00383152 | |||||||||
| WBVar00383153 | |||||||||
| WBVar00783254 | |||||||||
| WBVar00783255 | |||||||||
| WBVar00783256 | |||||||||
| WBVar00783257 | |||||||||
| WBVar00783258 | |||||||||
| WBVar00783259 | |||||||||
| WBVar00783260 | |||||||||
| WBVar00783261 | |||||||||
| WBVar00783262 | |||||||||
| WBVar00783263 | |||||||||
| WBVar00783264 | |||||||||
| WBVar00783265 | |||||||||
| WBVar01498941 | |||||||||
| WBVar00783266 | |||||||||
| WBVar02120959 | |||||||||
| Strain | WBStrain00026486 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (25) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Concise_description | csc-1 encodes a novel protein conserved amongst Caenorhabditis nematodes; CSC-1 is a member of the Aurora B kinase complex (chromosome passenger complex) that, in C. elegans, also includes ICP-1, BIR-1, and AIR-2; CSC-1 localizes to meiotic and mitotic chromosomes, as well as to the spindle midzone; CSC-1 is required for localization of the AIR-2 kinase, and CSC-1, ICP-1, and BIR-1 are all interdependent for their localization. | Paper_evidence | WBPaper00005872 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 22 Feb 2013 00:00:00 | ||||||||
| Automated_description | Involved in mitotic cleavage furrow ingression and nuclear division. Located in condensed nuclear chromosome; meiotic spindle midzone; and mitotic spindle midzone. Expressed in oocyte. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48E1B.12 | |||||||
| Corresponding_transcript | Y48E1B.12.1 | ||||||||
| Other_sequence | CBC05927_1 | ||||||||
| CJC03848_1 | |||||||||
| CR10025 | |||||||||
| PT01422 | |||||||||
| CRC01579_1 | |||||||||
| Associated_feature | WBsf644808 | ||||||||
| WBsf990464 | |||||||||
| WBsf222375 | |||||||||
| WBsf222376 | |||||||||
| WBsf222377 | |||||||||
| WBsf222378 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr2554 | ||||||||
| Expr1019181 | |||||||||
| Expr1030502 | |||||||||
| Expr1160360 | |||||||||
| Expr2010548 | |||||||||
| Expr2028788 | |||||||||
| Antibody | WBAntibody00000622 | ||||||||
| WBAntibody00000623 | |||||||||
| WBAntibody00002844 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Map | II | Position | 18.4151 | Error | 0.064433 | |||
| Positive | Positive_clone | Y48E1B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4842 | |||||||
| 4806 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005872 | ||||||||
| WBPaper00024319 | |||||||||
| WBPaper00025124 | |||||||||
| WBPaper00025213 | |||||||||
| WBPaper00027235 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
