WormBase Tree Display for Gene: WBGene00000755

WBGene00000755 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: R09A8
  Identity: Version: 2
    Name: CGC_name: col-182 Person_evidence: WBPerson345
      Sequence_name: R09A8.4
      Molecular_name: R09A8.4
      Other_name: CELE_R09A8.4 Accession_evidence: NDB BX284606
      Public_name: col-182
    DB_info: Database: AceView gene XN254
        WormQTL gene WBGene00000755
        WormFlux gene WBGene00000755
        NDB locus_tag CELE_R09A8.4
        NCBI gene 187723
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 08 Feb 2019 14:13:06 WBPerson1983 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Gene_class: col
    Allele (31)
    Possibly_affected_by: WBVar02152957
    RNASeq_FPKM (74)
    Ortholog: WBGene00051148 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
      WBGene00023585 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
      WBGene00124261 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
      WBGene00153340 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00162035 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00101807 Pristionchus pacificus From_analysis: Inparanoid_8
    Paralog: WBGene00000648 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00000651 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00000678 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00000687 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Enriched in AFD; PLM; hypodermis; and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray and RNA-seq studies. Is affected by twenty-six chemicals including methylmercury hydroxide; 1-methylnicotinamide; and nicotinic acid based on RNA-seq; microarray; and proteomic studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: R09A8.4:wp196
      R09A8.4:wp270
    Corresponding_pseudogene: R09A8.4
    Other_sequence (60)
    Associated_feature: WBsf654485
      WBsf238075
  Experimental_info: Expr_pattern: Expr1026201
      Expr1030462
      Expr1155257
      Expr2010377
      Expr2028619
    Drives_construct: WBCnstr00037303
    Construct_product: WBCnstr00037303
    Microarray_results (16)
    Expression_cluster (220)
    Interaction (210)
  Map_info: Map: X Position: 7.40925 Error: 0.066547
    Positive: Positive_clone: R09A8 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
    WBPaper00059191
    WBPaper00059673
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    This gene appears to be a strain specific Pseudogene, non-N2 wild isolates lack a small insertion that causes a frameshift in the N2 gene. Paper_evidence: WBPaper00059673
      Curator_confirmed: WBPerson1983
  Method: Gene