WormBase Tree Display for Gene: WBGene00000673

WBGene00000673 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F14F7
  Identity: Version: 1
    Name: CGC_name: col-98 Person_evidence: WBPerson345
      Sequence_name: F14F7.1
      Molecular_name: F14F7.1
        F14F7.1.1
        CE15821
      Other_name: CELE_F14F7.1 Accession_evidence: NDB BX284603
      Public_name: col-98
    DB_info: Database: AceView gene 3O109
        WormQTL gene WBGene00000673
        WormFlux gene WBGene00000673
        NDB locus_tag CELE_F14F7.1
        Panther gene CAEEL|WormBase=WBGene00000673|UniProtKB=O17805
          family PTHR24637
        NCBI gene 176724
        RefSeq protein NM_067302.6
        TrEMBL UniProtAcc O17805
        UniProt_GCRP UniProtAcc O17805
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (22)
    RNASeq_FPKM (74)
    GO_annotation: 00030752
      00030753
      00030754
      00107668
    Ortholog: WBGene00063423 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00035924 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00154759 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00145090 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125679 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00228353 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4760 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13015 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16801 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11350 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16683 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19895 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5897 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19843 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g25476 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g3199 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24493 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00722.g13680 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_24418.g27167 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-col-98 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17996 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00344.g9804 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_010942 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g5584 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30295400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g9279 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237999 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00288383 Trichuris muris From_analysis: WormBase-Compara
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F14F7.1
    Corresponding_transcript: F14F7.1.1
    Other_sequence (17)
    Associated_feature: WBsf716757
      WBsf716758
      WBsf994782
      WBsf994783
      WBsf225957
  Experimental_info: RNAi_result: WBRNAi00114421 Inferred_automatically: RNAi_primary
      WBRNAi00064317 Inferred_automatically: RNAi_primary
      WBRNAi00097114 Inferred_automatically: RNAi_primary
      WBRNAi00044620 Inferred_automatically: RNAi_primary
      WBRNAi00025111 Inferred_automatically: RNAi_primary
      WBRNAi00006012 Inferred_automatically: RNAi_primary
      WBRNAi00013293 Inferred_automatically: RNAi_primary
      WBRNAi00030953 Inferred_automatically: RNAi_primary
      WBRNAi00027283 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017352
      Expr1030398
      Expr1148588
      Expr2010445
      Expr2028685
    Drives_construct: WBCnstr00037380
    Construct_product: WBCnstr00037380
    Microarray_results (19)
    Expression_cluster (346)
    Interaction (58)
  Map_info: Map: III Position: 20.745
    Positive: Positive_clone: F14F7 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027108
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene