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WormBase Tree Display for Gene: WBGene00035924

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Name Class

WBGene00035924SMapS_parentSequencecb25.fpc4030a2
IdentityVersion2
NameCGC_nameCbr-col-98From_analysisInferred_from_orthology
Sequence_nameCBG15782
Molecular_nameCBG15782
CBG15782.1
CBP03787
Other_nameCBG_15782Accession_evidenceNDBHE600979
Public_nameCbr-col-98
DB_infoDatabaseNDBlocus_tagCBG_15782
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:05WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-col-98
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
RNASeq_FPKMWBls:0000002362.346From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
649.584From_analysisRNASeq.briggsae.WBls:0000002.control_mean
650.827From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
935.58From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
337.729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
506.586From_analysisRNASeq.briggsae.WBls:0000002.control_median
571.62From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.84969From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.69938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.56646From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.142144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.579052From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.01596From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.074223From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.308693From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.406803From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.492997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002715.4695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
54.4116From_analysisRNASeq.briggsae.WBls:0000027.control_mean
65.9287From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
81.8366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
62.6223From_analysisRNASeq.briggsae.WBls:0000027.control_mean
73.8827From_analysisRNASeq.briggsae.WBls:0000027.control_median
87.2543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035537.116From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381056.43From_analysisRNASeq.briggsae.WBls:0000038.control_median
1207.54From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1513.96From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2308.03From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
409.275From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
598.897From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041293.957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
515.59From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
526.616From_analysisRNASeq.briggsae.WBls:0000041.control_mean
553.918From_analysisRNASeq.briggsae.WBls:0000041.control_median
592.246From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
704.67From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
298.812From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
407.201From_analysisRNASeq.briggsae.WBls:0000041.control_median
409.076From_analysisRNASeq.briggsae.WBls:0000041.control_mean
49.1821From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063185.381From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
190.59From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
203.555From_analysisRNASeq.briggsae.WBls:0000063.control_mean
205.096From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
206.722From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
229.988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1863.99From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
205.909From_analysisRNASeq.briggsae.WBls:0000063.control_median
480.294From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101336.779From_analysisRNASeq.briggsae.total_over_all_stages.control_median
507.566From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
261.973From_analysisRNASeq.briggsae.total_over_all_stages.control_median
456.77From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00139381
Ortholog (28)
Paralog (155)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-98.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG15782
Corresponding_CDS_historyCBG15782:bp194
Corresponding_transcriptCBG15782.1
Other_sequence (12)
Experimental_infoExpr_patternExpr1051356
Microarray_resultsGPL8303_CB6_WBGene00035924_A
GPL8303_CB6_WBGene00035924_B
GPL14143_CBG15782_414-473_0.676_18_C
GPL14143_CBG15782_611-670_0.872_3_B
GPL14143_CBG15782_836-895_0.521_59_A
MethodGene