WormBase Tree Display for Sequence: F14F7
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| F14F7 | DNA | F14F7 | 25468 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00014639 | 1 | 77 | |
| WBGene00197440 | 6685 | 6757 | ||||
| WBGene00206390 | 21482 | 22443 | ||||
| WBGene00008811 | 20286 | 18958 | ||||
| WBGene00008810 | 15125 | 18595 | ||||
| WBGene00000673 | 9586 | 10804 | ||||
| WBGene00008809 | 11584 | 14623 | ||||
| WBGene00014329 | 6756 | 6685 | ||||
| CDS_child (60) | ||||||
| Transcript | F14F7.6 | 6685 | 6757 | |||
| F14F7.t1 | 6756 | 6685 | ||||
| F14F7.1.1 | 9586 | 10804 | ||||
| F14F7.2.1 | 11584 | 14623 | ||||
| F14F7.3.1 | 15125 | 18595 | ||||
| F14F7.4.1 | 20286 | 18958 | ||||
| F14F7.7.1 | 21482 | 22436 | ||||
| F14F7.7.2 | 21662 | 22443 | ||||
| PCR_product (20) | ||||||
| Allele (464) | ||||||
| Oligo_set | Aff_F14F7.1 | 10096 | 10695 | |||
| Aff_F14F7.2 | 13744 | 14527 | ||||
| Aff_F14F7.3 | 16983 | 18511 | ||||
| Aff_F14F7.4 | 19891 | 19021 | ||||
| Feature_object (118) | ||||||
| Feature_data | F14F7:Polysome | 1 | 25468 | |||
| F14F7:TranscriptionallyActiveRegion | 1 | 25468 | ||||
| F14F7:ChIPSeqTF | 1 | 25468 | ||||
| F14F7:TRF | 1 | 25468 | ||||
| F14F7:Dust | 1 | 25468 | ||||
| F14F7:inverted | 1 | 25468 | ||||
| Homol_data (18) | ||||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | F54F12 | 25365 | ||||
| Overlap_left | ZK1010 | |||||
| Clone_left_end | F14F7 | 1 | ||||
| F54F12 | 25365 | |||||
| Clone_right_end | ZK1010 | 456 | ||||
| DB_info | Database | EMBL | NDB_AC | Z81503 | ||
| NDB_SV | Z81503.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | McMurray AA | ||||
| From_laboratory | HX | |||||
| Date_directory | 970227 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F14F7 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | e746430e85560f7a689998625ac2996b | ||||
| Status | Finished | 27 Feb 1997 00:00:00 | ||||
| Submitted | 06 Nov 1996 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-III | Ends | Left | 6445 | ||
| Right | 6464 | |||||
| Interpolated_map_position | III | 20.7472 | ||||
| Assembly_tags | Finished Left | 1 | 4 | F14F7 | ||
| Clone left end | 1 | 4 | F14F7 | |||
| 25365 | 25368 | F54F12 | ||||
| Clone right end | 453 | 456 | ZK1010 | |||
| annotation | 3700 | 3702 | reads 277, 880 and 1061 (a single clone) have ATG but all other reads have AGG. Edited to AGG | |||
| 3650 | 3660 | reads 277,880 and 1061 (single clone) have 3 A's and 8 T's. The rest have 4 A's and 7 T's. Edited to 4 A's and 7 T's. | ||||
| 1274 | 1351 | |||||
| 1352 | 1413 | |||||
| 22798 | 23453 | tandem repeat of length 1.1kb. A typical repeat element is TACCGCCCGCTACCACCGC (a 19-mer) | ||||
| Finished Right | 25465 | 25468 | F14F7 | |||
| Method | Genomic_canonical |
