WormBase Tree Display for Gene: WBGene00000562
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| WBGene00000562 | SMap | S_parent | Sequence | F14H8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cng-1 | Person_evidence | WBPerson746 | |||||
| Sequence_name | F14H8.6 | ||||||||
| Molecular_name | F14H8.6b | ||||||||
| F14H8.6a | |||||||||
| CE41791 | |||||||||
| F14H8.6b.1 | |||||||||
| F14H8.6b.2 | |||||||||
| F14H8.6c | |||||||||
| Other_name | CELE_F14H8.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | cng-1 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00000562 | |||||
| WormFlux | gene | WBGene00000562 | |||||||
| NDB | locus_tag | CELE_F14H8.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000562|UniProtKB=A8WI01 | |||||||
| family | PTHR45638 | ||||||||
| NCBI | gene | 180004 | |||||||
| RefSeq | protein | NR_070019.1 | |||||||
| NR_070020.1 | |||||||||
| NM_001129446.5 | |||||||||
| TrEMBL | UniProtAcc | A8WI01 | |||||||
| UniProt_GCRP | UniProtAcc | A8WI01 | |||||||
| RNAcentral | URSid | URS000012A901 | |||||||
| URS0000452304 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cng | ||||||||
| Allele (95) | |||||||||
| Strain | WBStrain00023530 | ||||||||
| WBStrain00023534 | |||||||||
| WBStrain00023535 | |||||||||
| WBStrain00023537 | |||||||||
| WBStrain00033082 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00000487 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00006526 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006525 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000563 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022295 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001171 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006830 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable cGMP binding activity; intracellular cAMP-activated cation channel activity; and intracellular cGMP-activated cation channel activity. Involved in negative regulation of cGMP-mediated signaling; response to oxygen levels; and sensory perception. Located in neuronal cell body. Expressed in amphid neurons and head neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F14H8.6b | |||||||
| Corresponding_CDS_history | F14H8.6:wp20 | ||||||||
| F14H8.6a:wp230 | |||||||||
| F14H8.6b:wp184 | |||||||||
| F14H8.6c:wp230 | |||||||||
| Corresponding_transcript | F14H8.6a | ||||||||
| F14H8.6c | |||||||||
| F14H8.6b.1 | |||||||||
| F14H8.6b.2 | |||||||||
| Other_sequence | FG353711.1 | ||||||||
| FG348838.1 | |||||||||
| FG349551.1 | |||||||||
| FG351513.1 | |||||||||
| HBC16564_1 | |||||||||
| EX916571.1 | |||||||||
| FG585019.1 | |||||||||
| FG347412.1 | |||||||||
| FG351655.1 | |||||||||
| Associated_feature | WBsf653425 | ||||||||
| WBsf669761 | |||||||||
| WBsf669762 | |||||||||
| WBsf669763 | |||||||||
| WBsf1002213 | |||||||||
| WBsf235017 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013332 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013331 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044665 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016298 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065517 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030976 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065516 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088790 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102083 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8625 | ||||||||
| Expr9241 | |||||||||
| Expr11199 | |||||||||
| Expr1019166 | |||||||||
| Expr1030339 | |||||||||
| Expr1148638 | |||||||||
| Expr2010272 | |||||||||
| Expr2028514 | |||||||||
| Drives_construct | WBCnstr00013404 | ||||||||
| WBCnstr00013847 | |||||||||
| WBCnstr00018215 | |||||||||
| WBCnstr00037450 | |||||||||
| Construct_product | WBCnstr00013404 | ||||||||
| WBCnstr00037450 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (226) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | V | Position | 7.17589 | Error | 0.005638 | |||
| Positive | Positive_clone | F14H8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
