WormBase Tree Display for Gene: WBGene00000560
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WBGene00000560 | Evidence | Person_evidence | WBPerson168 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y46E12A | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cnc | ||||||
Allele (62) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00094059 | ||||||
00106070 | |||||||
00106071 | |||||||
Ortholog | WBGene00035459 | Caenorhabditis briggsae | From_analysis | OMA | |||
WBGene00061996 | Caenorhabditis remanei | From_analysis | OMA | ||||
WBGene00141653 | Caenorhabditis brenneri | From_analysis | OMA | ||||
chrIII_pilon.g7007 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00007989 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00007990 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00014698 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00014699 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00045211 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00194727 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00007992 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00007682 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00014700 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | cnc-6 encodes one of eleven C. elegans caenacin peptides; cnc-6 expression is strongly induced after infection by the fungus Drechmeria coniospora, suggesting that it functions as a secreted antimicrobial peptide in the innate immune response. | Paper_evidence | WBPaper00006488 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 04 Jan 2010 00:00:00 | ||||||
Automated_description | Involved in defense response to fungus and innate immune response. Expressed in intestine. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y46E12A.1 | |||||
Corresponding_transcript | Y46E12A.1.1 | ||||||
Other_sequence | NAC00286_2 | ||||||
MAC02348_1 | |||||||
BG467467.1 | |||||||
BU666480.1 | |||||||
BG467533.1 | |||||||
BU666521.1 | |||||||
CBC14285_1 | |||||||
Associated_feature | WBsf644961 | ||||||
WBsf224469 | |||||||
Experimental_info | RNAi_result | WBRNAi00037124 | Inferred_automatically | RNAi_primary | |||
WBRNAi00020019 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056659 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr8218 | ||||||
Expr1018503 | |||||||
Expr1160129 | |||||||
Expr2010266 | |||||||
Expr2028508 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (176) | |||||||
Map_info | Map | III | Position | -18.0035 | Error | 0.460795 | |
Positive | Positive_clone | Y46E12A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00006437 | ||||||
WBPaper00006488 | |||||||
WBPaper00032031 | |||||||
WBPaper00060703 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |